import jalview.api.AlignmentViewPanel;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentAnnotation;
-import jalview.datamodel.AlignmentAnnotation.TFType;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.AlignmentView;
import jalview.datamodel.PDBEntry.Type;
import jalview.datamodel.SequenceI;
import jalview.ext.jmol.JmolParser;
import jalview.structure.StructureImportSettings;
+import jalview.structure.StructureImportSettings.TFType;
import jalview.util.Platform;
/**
public AlignmentI readFile(File selectedFile, String file,
DataSourceType sourceType, FileFormatI fileFormat,
- AlignmentAnnotation.TFType tempfacType) throws IOException
+ StructureImportSettings.TFType tempfacType) throws IOException
{
this.selectedFile = selectedFile;