import jalview.datamodel.AlignmentAnnotation;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.AlignmentView;
+import jalview.util.MessageManager;
import java.io.File;
import java.io.InputStream;
* method
*/
public static final String[] WRITEABLE_FORMATS = new String[]
- { "BLC", "CLUSTAL", "FASTA", "MSF", "PileUp", "PIR", "PFAM", "AMSA",
- "STH", PhylipFile.FILE_DESC };
+ { "AMSA", "BLC", "CLUSTAL", "FASTA", "MSF", "PileUp", "PIR",
+ PhylipFile.FILE_DESC, "PFAM", "STH" };
/**
* List of extensions corresponding to file format types in WRITABLE_FNAMES
else
{
- throw new Exception(
- "Implementation error: Unknown file format string");
+ throw new Exception(MessageManager.getString("error.implementation_error_unknown_file_format_string"));
}
afile.setNewlineString(newline);
afile.addJVSuffix(jvsuffix);