import jalview.api.AlignmentViewPanel;
import jalview.datamodel.AlignmentExportData;
import jalview.exceptions.NoFileSelectedException;
+import jalview.gui.AlignFrame;
import jalview.gui.IProgressIndicator;
import jalview.gui.OOMWarning;
import jalview.json.binding.biojs.BioJSReleasePojo;
}
};
- AlignmentExportData exportData = jalview.gui.AlignFrame
- .getAlignmentForExport(JSONFile.FILE_DESC,
+ AlignmentExportData exportData = AlignFrame
+ .getAlignmentForExport(FileFormat.Json,
ap.getAlignViewport(), exportSettings);
String bioJSON = new FormatAdapter(ap, exportData.getSettings())
- .formatSequences(JSONFile.FILE_DESC, exportData
+ .formatSequences(FileFormat.Json, exportData
.getAlignment(), exportData.getOmitHidden(),
exportData.getStartEndPostions(), ap
.getAlignViewport().getColumnSelection());