JAL-1665 refactored Sequence.getSequenceFeatures

[jalview.git] / src / jalview / io / BioJsHTMLOutput.java

diff --git a/src/jalview/io/BioJsHTMLOutput.java b/src/jalview/io/BioJsHTMLOutput.java
index 163f311..2001338 100644 (file)
--- a/src/jalview/io/BioJsHTMLOutput.java
+++ b/src/jalview/io/BioJsHTMLOutput.java
@@ -53,9 +53,7 @@ public class BioJsHTMLOutput
               .getGlobalColourScheme());
       this.fr = ap.cloneFeatureRenderer();
       displayedFeatures = av.getFeaturesDisplayed();
-
-    exportJalviewAlignmentAsBioJsHtmlFile();
-  }
+    }
   }
 
   private void exportJalviewAlignmentAsBioJsHtmlFile()
@@ -139,8 +137,7 @@ public class BioJsHTMLOutput
       seqPojo.setName(name.toString());
       seqPojo.setSeq(seq.getSequenceAsString());
 
-      SequenceFeature[] seqFeatures = seq.getDatasetSequence()
-              .getSequenceFeatures();
+      SequenceFeature[] seqFeatures = seq.getSequenceFeatures();
       if (seqFeatures != null)
       {
         ArrayList<BioJsFeaturePojo> bjsSeqFeatures = new ArrayList<BioJsFeaturePojo>();