DBRefs now array

[jalview.git] / src / jalview / io / DBRefFetcher.java

diff --git a/src/jalview/io/DBRefFetcher.java b/src/jalview/io/DBRefFetcher.java
index 4488d02..01e67cf 100644 (file)
--- a/src/jalview/io/DBRefFetcher.java
+++ b/src/jalview/io/DBRefFetcher.java
@@ -135,13 +135,13 @@ public class DBRefFetcher implements Runnable
              seqIndex++, i++)\r
         {\r
           Sequence sequence = (Sequence) sequences.get(seqIndex);\r
-          Vector uprefs = jalview.util.DBRefUtils.selectRefs(sequence.getDBRef(), new String[] {\r
+          DBRefEntry [] uprefs = jalview.util.DBRefUtils.selectRefs(sequence.getDBRef(), new String[] {\r
               jalview.datamodel.DBRefSource.UNIPROT});\r
           if (uprefs!=null)\r
           {\r
             // we know the id for this entry, so don't note its ID in the unknownSequences list\r
-            for (int j=0,k=uprefs.size(); j<k; j++)\r
-              ids.add(((DBRefEntry) uprefs.get(j)).getAccessionId());\r
+            for (int j=0,k=uprefs.length; j<k; j++)\r
+              ids.add(uprefs[j].getAccessionId());\r
             unknownSequences.add(sequence);\r
           } else {\r
             if (!ids.contains(sequence.getName()))\r