import jalview.bin.Jalview;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.ColumnSelection;
+import jalview.datamodel.ContactMatrixTest;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.gui.AlignFrame;
if ((al != null) && (al.getHeight() > 0) && al.hasValidSequence())
{
+ al.addContactList(new ContactMatrixTest(al.getWidth()));
+
// construct and register dataset sequences
for (SequenceI sq : al.getSequences())
{