JAL-2629 choice of hmm profile now a parameter not a selection, apis simplified

[jalview.git] / src / jalview / io / FileLoader.java

diff --git a/src/jalview/io/FileLoader.java b/src/jalview/io/FileLoader.java
index 720abc9..798875f 100755 (executable)
--- a/src/jalview/io/FileLoader.java
+++ b/src/jalview/io/FileLoader.java
@@ -432,7 +432,6 @@ public class FileLoader implements Runnable
                  */
                 alignment.deleteSequence(alignment.getAbsoluteHeight() - 1);
                 alignment.insertSequenceAt(0, seq);
-                alignment.setHmmConsensus(seq);
               }
               viewport.getAlignPanel().adjustAnnotationHeight();
               viewport.updateSequenceIdColours();