SequenceI seq;\r
ColourSchemeI cs = null;\r
AlignmentI alignment = av.getAlignment();\r
- String r;\r
- String g;\r
- String b;\r
\r
// draws the top row, the measure rule\r
out.println("<tr><td colspan=\"6\"></td>");\r
"<table border=\"0\" cellpadding=\"0\" cellspacing=\"0\">\n");\r
\r
for (int startRes = 0; startRes < al.getWidth();\r
- startRes += av.getChunkWidth())\r
+ startRes += av.getWrappedWidth())\r
{\r
- int endRes = startRes + av.getChunkWidth();\r
+ int endRes = startRes + av.getWrappedWidth();\r
\r
if (endRes > al.getWidth())\r
{\r