{\r
this.av = av;\r
sr = new SequenceRenderer(av);\r
- JalviewFileChooser chooser = new JalviewFileChooser(jalview.bin.Cache.getProperty("LAST_DIRECTORY"));\r
+ JalviewFileChooser chooser = new JalviewFileChooser(jalview.bin.Cache.getProperty("LAST_DIRECTORY")\r
+ , new String[]{"html"}, "HTML files");\r
+\r
chooser.setFileView(new JalviewFileView());\r
chooser.setDialogTitle("Save as HTML");\r
chooser.setToolTipText("Save");\r
{\r
seq = alignment.getSequenceAt(i);\r
groups = alignment.findAllGroups( seq );\r
- out.println("<tr><td nowrap>"+seq.getDisplayId()+" </td>");\r
+ if(av.getShowFullId())\r
+ out.println("<tr><td nowrap>"+seq.getDisplayId()+" </td>");\r
+ else\r
+ out.println("<tr><td nowrap>"+seq.getName()+" </td>");\r
+\r
\r
\r
for (int res = 0; res < seq.getLength(); res++)\r
out.println("<tr>");\r
seq = al.getSequenceAt(s);\r
groups = al.findAllGroups( seq );\r
- out.println("<td nowrap>"+seq.getDisplayId()+" </td>");\r
+ if(av.getShowFullId())\r
+ out.println("<td nowrap>"+seq.getDisplayId()+" </td>");\r
+ else\r
+ out.println("<td nowrap>"+seq.getName()+" </td>");\r
\r
for (int res = startRes; res < endRes; res++)\r
{\r