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JAL-3365 expand range of allowed DSSP secondary structure symbols in Stockholm files
[jalview.git] / src / jalview / io / HtmlSvgOutput.java
diff --git a/src/jalview/io/HtmlSvgOutput.java b/src/jalview/io/HtmlSvgOutput.java
index d653e4b..4b66f81 100644 (file)
--- a/src/jalview/io/HtmlSvgOutput.java
+++ b/src/jalview/io/HtmlSvgOutput.java
@@ -26,7 +26,6 @@ import jalview.gui.LineartOptions;
 import jalview.gui.OOMWarning;
 import jalview.math.AlignmentDimension;
 import jalview.util.MessageManager;
-import jalview.util.dialogrunner.RunResponse;
 
 import java.awt.Graphics;
 import java.awt.print.PrinterException;
@@ -35,8 +34,6 @@ import java.io.FileOutputStream;
 import java.io.IOException;
 import java.util.concurrent.atomic.AtomicBoolean;
 
-import javax.swing.JOptionPane;
-
 import org.jfree.graphics2d.svg.SVGGraphics2D;
 import org.jfree.graphics2d.svg.SVGHints;
 
@@ -61,8 +58,8 @@ public class HtmlSvgOutput extends HTMLOutput
     return ap.printWrappedAlignment(pwidth, pheight, pi, pg[0]);
   }
 
-  String getHtml(String titleSvg, String alignmentSvg,
-          String jsonData, boolean wrapped)
+  String getHtml(String titleSvg, String alignmentSvg, String jsonData,
+          boolean wrapped)
   {
     StringBuilder htmlSvg = new StringBuilder();
     htmlSvg.append("<html>\n");
@@ -191,8 +188,8 @@ public class HtmlSvgOutput extends HTMLOutput
   @Override
   public boolean isEmbedData()
   {
-    return Boolean.valueOf(
-            jalview.bin.Cache.getDefault("EXPORT_EMBBED_BIOJSON", "true"));
+    return Boolean
+            .valueOf(Cache.getDefault("EXPORT_EMBBED_BIOJSON", "true"));
   }
 
   @Override
@@ -214,7 +211,7 @@ public class HtmlSvgOutput extends HTMLOutput
       /*
        * configure the action to run on OK in the dialog
        */
-      RunResponse okAction = new RunResponse(JOptionPane.OK_OPTION)
+      Runnable okAction = new Runnable()
       {
         @Override
         public void run()
@@ -229,7 +226,7 @@ public class HtmlSvgOutput extends HTMLOutput
       if (renderStyle.equalsIgnoreCase("Prompt each time") && !isHeadless())
       {
         LineartOptions svgOption = new LineartOptions("HTML", textOption);
-        svgOption.setResponseAction(new RunResponse(JOptionPane.NO_OPTION)
+        svgOption.setResponseAction(1, new Runnable()
         {
           @Override
           public void run()
@@ -239,7 +236,7 @@ public class HtmlSvgOutput extends HTMLOutput
                     getDescription()));
           }
         });
-        svgOption.setResponseAction(okAction);
+        svgOption.setResponseAction(0, okAction);
         svgOption.showDialog();
         /* no code here - JalviewJS cannot execute it */
       }
@@ -281,11 +278,9 @@ public class HtmlSvgOutput extends HTMLOutput
               aDimension.getWidth(), aDimension.getHeight());
       if (!textCharacters) // Lineart selected
       {
-        idPanelGraphics.setRenderingHint(
-                SVGHints.KEY_DRAW_STRING_TYPE,
+        idPanelGraphics.setRenderingHint(SVGHints.KEY_DRAW_STRING_TYPE,
                 SVGHints.VALUE_DRAW_STRING_TYPE_VECTOR);
-        alignPanelGraphics.setRenderingHint(
-                SVGHints.KEY_DRAW_STRING_TYPE,
+        alignPanelGraphics.setRenderingHint(SVGHints.KEY_DRAW_STRING_TYPE,
                 SVGHints.VALUE_DRAW_STRING_TYPE_VECTOR);
       }
       if (ap.av.getWrapAlignment())
@@ -295,15 +290,15 @@ public class HtmlSvgOutput extends HTMLOutput
       }
       else
       {
-        printUnwrapped(aDimension.getWidth(), aDimension.getHeight(),
-                0, idPanelGraphics, alignPanelGraphics);
+        printUnwrapped(aDimension.getWidth(), aDimension.getHeight(), 0,
+                idPanelGraphics, alignPanelGraphics);
       }
 
       String idPanelSvgData = idPanelGraphics.getSVGDocument();
       String alignPanelSvgData = alignPanelGraphics.getSVGDocument();
       String jsonData = getBioJSONData();
-      String htmlData = getHtml(idPanelSvgData, alignPanelSvgData,
-              jsonData, ap.av.getWrapAlignment());
+      String htmlData = getHtml(idPanelSvgData, alignPanelSvgData, jsonData,
+              ap.av.getWrapAlignment());
       FileOutputStream out = new FileOutputStream(generatedFile);
       out.write(htmlData.getBytes());
       out.flush();