reply = "PileUp";\r
break;\r
}\r
- if((data.indexOf("!!")>-1)\r
- && (data.indexOf("!!")<data.indexOf("_MULTIPLE_ALIGNMENT ")))\r
+ if((data.indexOf("//")==0)\r
+ || ((data.indexOf("!!")>-1)\r
+ && (data.indexOf("!!")<data.indexOf("_MULTIPLE_ALIGNMENT "))))\r
{\r
reply = "MSF";\r
break;\r