renamed menu for jPred to Jnet.

[jalview.git] / src / jalview / io / JalviewFileView.java

diff --git a/src/jalview/io/JalviewFileView.java b/src/jalview/io/JalviewFileView.java
index 3c96a28..f4c7f23 100755 (executable)
--- a/src/jalview/io/JalviewFileView.java
+++ b/src/jalview/io/JalviewFileView.java
@@ -1,79 +1,97 @@
+/*\r
+* Jalview - A Sequence Alignment Editor and Viewer\r
+* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+*\r
+* This program is free software; you can redistribute it and/or\r
+* modify it under the terms of the GNU General Public License\r
+* as published by the Free Software Foundation; either version 2\r
+* of the License, or (at your option) any later version.\r
+*\r
+* This program is distributed in the hope that it will be useful,\r
+* but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
+* GNU General Public License for more details.\r
+*\r
+* You should have received a copy of the GNU General Public License\r
+* along with this program; if not, write to the Free Software\r
+* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
+*/\r
 package jalview.io;\r
 \r
-import javax.swing.filechooser.FileView;\r
-import javax.swing.*;\r
 import java.io.*;\r
+\r
 import java.util.*;\r
 \r
-public class JalviewFileView extends FileView\r
-{\r
-  static Hashtable alignSuffix = new Hashtable();\r
-  static{\r
-    alignSuffix.put("fasta", "Fasta file");\r
-    alignSuffix.put("fa", "Fasta file");\r
-    alignSuffix.put("fastq", "Fasta file");\r
-    alignSuffix.put("blc", "BLC file");\r
-    alignSuffix.put("msf", "MSF file");\r
-    alignSuffix.put("pfam", "PFAM file");\r
-    alignSuffix.put("aln", "Clustal file");\r
-    alignSuffix.put("pir", "PIR file");\r
-  }\r
-  public String getTypeDescription(File f)\r
-  {\r
-    String extension = getExtension(f);\r
-    String type = null;\r
-\r
-    if (extension != null)\r
-    {\r
-      if (alignSuffix.containsKey(extension))\r
-      {\r
-        type = alignSuffix.get(extension).toString();\r
-      }\r
+import javax.swing.*;\r
+import javax.swing.filechooser.FileView;\r
+\r
+\r
+public class JalviewFileView extends FileView {\r
+    static Hashtable alignSuffix = new Hashtable();\r
+\r
+    static {\r
+        alignSuffix.put("fasta", "Fasta file");\r
+        alignSuffix.put("fa", "Fasta file");\r
+        alignSuffix.put("fastq", "Fasta file");\r
+        alignSuffix.put("blc", "BLC file");\r
+        alignSuffix.put("msf", "MSF file");\r
+        alignSuffix.put("pfam", "PFAM file");\r
+        alignSuffix.put("aln", "Clustal file");\r
+        alignSuffix.put("pir", "PIR file");\r
+    }\r
+\r
+    public String getTypeDescription(File f) {\r
+        String extension = getExtension(f);\r
+        String type = null;\r
+\r
+        if (extension != null) {\r
+            if (alignSuffix.containsKey(extension)) {\r
+                type = alignSuffix.get(extension).toString();\r
+            }\r
+        }\r
+\r
+        return type;\r
     }\r
-    return type;\r
-  }\r
-\r
-  public Icon getIcon(File f)\r
-  {\r
-    String extension = getExtension(f);\r
-    Icon icon = null;\r
-\r
-    if (extension != null)\r
-    {\r
-      if (alignSuffix.containsKey(extension))\r
-      {\r
-        icon = createImageIcon("/images/file.png");\r
-      }\r
+\r
+    public Icon getIcon(File f) {\r
+        String extension = getExtension(f);\r
+        Icon icon = null;\r
+\r
+        if (extension != null) {\r
+            if (alignSuffix.containsKey(extension)) {\r
+                icon = createImageIcon("/images/file.png");\r
+            }\r
+        }\r
+\r
+        return icon;\r
     }\r
-    return icon;\r
-  }\r
-\r
-\r
-  /*\r
-   * Get the extension of a file.\r
-   */\r
-  public static String getExtension(File f) {\r
-      String ext = null;\r
-      String s = f.getName();\r
-      int i = s.lastIndexOf('.');\r
-\r
-      if (i > 0 &&  i < s.length() - 1) {\r
-          ext = s.substring(i+1).toLowerCase();\r
-      }\r
-      return ext;\r
-  }\r
-\r
-  /** Returns an ImageIcon, or null if the path was invalid. */\r
-  protected static ImageIcon createImageIcon(String path) {\r
-      java.net.URL imgURL = JalviewFileView.class.getResource(path);\r
-      if (imgURL != null) {\r
-          return new ImageIcon(imgURL);\r
-      } else {\r
-          System.err.println("JalviewFileView.createImageIcon: Couldn't find file: " + path);\r
-          return null;\r
-      }\r
-  }\r
 \r
-}\r
+    /*\r
+     * Get the extension of a file.\r
+     */\r
+    public static String getExtension(File f) {\r
+        String ext = null;\r
+        String s = f.getName();\r
+        int i = s.lastIndexOf('.');\r
 \r
+        if ((i > 0) && (i < (s.length() - 1))) {\r
+            ext = s.substring(i + 1).toLowerCase();\r
+        }\r
 \r
+        return ext;\r
+    }\r
+\r
+    /** Returns an ImageIcon, or null if the path was invalid. */\r
+    protected static ImageIcon createImageIcon(String path) {\r
+        java.net.URL imgURL = JalviewFileView.class.getResource(path);\r
+\r
+        if (imgURL != null) {\r
+            return new ImageIcon(imgURL);\r
+        } else {\r
+            System.err.println(\r
+                "JalviewFileView.createImageIcon: Couldn't find file: " + path);\r
+\r
+            return null;\r
+        }\r
+    }\r
+}\r