Any character non aa or nucleotide is a space

[jalview.git] / src / jalview / io / PIRFile.java

diff --git a/src/jalview/io/PIRFile.java b/src/jalview/io/PIRFile.java
index 8b05171..a33e118 100755 (executable)
--- a/src/jalview/io/PIRFile.java
+++ b/src/jalview/io/PIRFile.java
@@ -83,12 +83,6 @@ public class PIRFile
         {\r
           sequence.setLength(sequence.length() - 1);\r
           newSeq.setSequence(sequence.toString());\r
-          if (!isValidProteinSequence(newSeq.getSequence()))\r
-          {\r
-            throw new IOException(AppletFormatAdapter.INVALID_CHARACTERS\r
-                                  +" : "+ newSeq.getName()\r
-                                  +" : "+invalidCharacter);\r
-          }\r
 \r
           seqs.addElement(newSeq);\r
 \r