JAL-3365 expand range of allowed DSSP secondary structure symbols in Stockholm files

[jalview.git] / src / jalview / io / SequenceAnnotationReport.java

diff --git a/src/jalview/io/SequenceAnnotationReport.java b/src/jalview/io/SequenceAnnotationReport.java
index 7fc04e1..95bd1cc 100644 (file)
--- a/src/jalview/io/SequenceAnnotationReport.java
+++ b/src/jalview/io/SequenceAnnotationReport.java
@@ -20,17 +20,14 @@
  */
 package jalview.io;
 
-import java.util.Locale;
 import java.util.ArrayList;
-import java.util.Arrays;
 import java.util.Collection;
 import java.util.Comparator;
 import java.util.LinkedHashMap;
 import java.util.List;
+import java.util.Locale;
 import java.util.Map;
 
-import com.google.common.collect.Lists;
-
 import jalview.api.FeatureColourI;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.DBRefSource;
@@ -539,7 +536,7 @@ public class SequenceAnnotationReport
   protected int appendDbRefs(final StringBuilder sb, SequenceI ds,
           boolean summary)
   {
-    List<DBRefEntry> dbrefs,dbrefset = ds.getDBRefs();
+    List<DBRefEntry> dbrefs, dbrefset = ds.getDBRefs();
 
     if (dbrefset == null)
     {
@@ -549,9 +546,9 @@ public class SequenceAnnotationReport
     // PATCH for JAL-3980 defensive copy
 
     dbrefs = new ArrayList<DBRefEntry>();
-    
+
     dbrefs.addAll(dbrefset);
-    
+
     // note this sorts the refs held on the sequence!
     dbrefs.sort(comparator);
     boolean ellipsis = false;