Don't parse input id, leave it as it is

[jalview.git] / src / jalview / io / SequenceFeatureFetcher.java

diff --git a/src/jalview/io/SequenceFeatureFetcher.java b/src/jalview/io/SequenceFeatureFetcher.java
index 5ecb417..b3de0f3 100755 (executable)
--- a/src/jalview/io/SequenceFeatureFetcher.java
+++ b/src/jalview/io/SequenceFeatureFetcher.java
@@ -112,7 +112,7 @@ public class SequenceFeatureFetcher implements Runnable
           if(!ids.contains(sequence.getName()))\r
           {\r
             ids.add(sequence.getName());\r
-            unknownSequences.add(sequence.getName());\r
+            unknownSequences.add(sequence);\r
           }\r
         }\r
 \r
@@ -210,7 +210,7 @@ public class SequenceFeatureFetcher implements Runnable
       if (sequence == null)\r
       {\r
         //Sequence maybe Name, not Accession\r
-        idmatch = entry.getName().elementAt(0).toString();;\r
+        idmatch = entry.getName().elementAt(0).toString();\r
         sequence = dataset.findName(idmatch);\r
       }\r
 \r
@@ -221,7 +221,7 @@ public class SequenceFeatureFetcher implements Runnable
       }\r
 \r
       ids.remove(sequence.getName());\r
-      unknownSequences.remove(sequence.getName());\r
+      unknownSequences.remove(sequence);\r
 \r
       String nonGapped = AlignSeq.extractGaps("-. ", sequence.getSequence());\r
 \r