this.visibleChainAnnotation = StructureImportSettings
.isVisibleChainAnnotation();
this.predictSecondaryStructure = StructureImportSettings
- .isPredictSecondaryStructure();
+ .isProcessSecondaryStructure();
this.externalSecondaryStructure = StructureImportSettings
.isExternalSecondaryStructure();
StructureImportSettings.setShowSeqFeatures(false);
StructureImportSettings.setVisibleChainAnnotation(false);
StructureImportSettings
- .setPredictSecondaryStructure(predictSecondaryStructure);
+ .setProcessSecondaryStructure(predictSecondaryStructure);
StructureImportSettings
.setExternalSecondaryStructure(externalSecondaryStructure);
Object jmf = constructor.newInstance(args);