Sequence is char []

[jalview.git] / src / jalview / io / WSWUBlastClient.java

diff --git a/src/jalview/io/WSWUBlastClient.java b/src/jalview/io/WSWUBlastClient.java
index 782e0ed..e2910ee 100755 (executable)
--- a/src/jalview/io/WSWUBlastClient.java
+++ b/src/jalview/io/WSWUBlastClient.java
@@ -1,6 +1,6 @@
 /*\r
 * Jalview - A Sequence Alignment Editor and Viewer\r
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+* Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
 *\r
 * This program is free software; you can redistribute it and/or\r
 * modify it under the terms of the GNU General Public License\r
@@ -286,7 +286,7 @@ public class WSWUBlastClient
               Data inputs[] = new Data[1];\r
               Data input= new Data();\r
               input.setType("sequence");\r
-              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequence()));\r
+              input.setContent(AlignSeq.extractGaps("-. ",sequence.getSequenceAsString()));\r
               inputs[0]=input;\r
 \r
               WSWUBlastService service = new WSWUBlastServiceLocator();\r