git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
| inline |
side by side
JAL-2898 show 'stop_gained' variants on peptide sequences
[jalview.git]
/
src
/
jalview
/
io
/
gff
/
SequenceOntologyI.java
diff --git
a/src/jalview/io/gff/SequenceOntologyI.java
b/src/jalview/io/gff/SequenceOntologyI.java
index
10ca7ec
..
307e1d1
100644
(file)
--- a/
src/jalview/io/gff/SequenceOntologyI.java
+++ b/
src/jalview/io/gff/SequenceOntologyI.java
@@
-48,6
+48,9
@@
public interface SequenceOntologyI
// SO:0001992
public static final String NONSYNONYMOUS_VARIANT = "nonsynonymous_variant";
+ // SO:0001587
+ public static final String STOP_GAINED = "stop_gained";
+
// SO:0000147
public static final String EXON = "exon";