JAL-1807 explicit imports (jalview.io.*)

[jalview.git] / src / jalview / io / vamsas / Datasetsequence.java

diff --git a/src/jalview/io/vamsas/Datasetsequence.java b/src/jalview/io/vamsas/Datasetsequence.java
index 9c86557..d170513 100644 (file)
--- a/src/jalview/io/vamsas/Datasetsequence.java
+++ b/src/jalview/io/vamsas/Datasetsequence.java
@@ -23,6 +23,7 @@ package jalview.io.vamsas;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.SequenceI;
 import jalview.io.VamsasAppDatastore;
+
 import uk.ac.vamsas.objects.core.DataSet;
 import uk.ac.vamsas.objects.core.DbRef;
 import uk.ac.vamsas.objects.core.Sequence;
@@ -137,9 +138,8 @@ public class Datasetsequence extends DatastoreItem
 
       for (int sf = 0; sf < sfSize; sf++)
       {
-        modified |= new jalview.io.vamsas.Sequencefeature(datastore,
-                (jalview.datamodel.SequenceFeature) sq
-                        .getSequenceFeatures()[sf], dataset,
+        modified |= new Sequencefeature(datastore,
+                sq.getSequenceFeatures()[sf], dataset,
                 (Sequence) vobj).docWasUpdated();
       }
     }
@@ -181,7 +181,7 @@ public class Datasetsequence extends DatastoreItem
       // jalview.datamodel.DBRefEntry dbentry;
       for (int db = 0; db < entries.length; db++)
       {
-        modifiedthedoc |= new jalview.io.vamsas.Dbref(datastore,
+        modifiedthedoc |= new Dbref(datastore,
         // dbentry =
                 entries[db], sq, (Sequence) vobj, dataset).docWasUpdated();
 
@@ -208,7 +208,7 @@ public class Datasetsequence extends DatastoreItem
       // DbRef dbentry;
       for (int db = 0; db < entries.length; db++)
       {
-        modifiedtheseq |= new jalview.io.vamsas.Dbref(datastore,
+        modifiedtheseq |= new Dbref(datastore,
         // dbentry =
                 entries[db], vsq, sq).jvWasUpdated();
       }