+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.javascript;
-import java.net.URL;
import jalview.appletgui.AlignFrame;
-import jalview.appletgui.AlignViewport;
import jalview.bin.JalviewLite;
import jalview.datamodel.ColumnSelection;
import jalview.datamodel.SequenceGroup;
import jalview.structure.SelectionSource;
-import netscape.javascript.JSObject;
public class JsSelectionSender extends JSFunctionExec implements
jalview.structure.SelectionListener, JsCallBack
String setid = "";
String viewid = "";
AlignFrame src = _af;
- // filter events if necessary
- if (source instanceof AlignViewport)
+ if (source != null)
{
- if (_af != null
- && !_af.alignPanel.av.getSequenceSetId().equals(
- ((AlignViewport) source).getSequenceSetId()))
+ if (source instanceof jalview.appletgui.AlignViewport
+ && ((jalview.appletgui.AlignViewport) source).applet.currentAlignFrame.viewport == source)
{
- return;
- }
- jalview.appletgui.AlignmentPanel[] aps = jalview.appletgui.PaintRefresher
- .getAssociatedPanels(setid = ((AlignViewport) source)
- .getSequenceSetId());
- for (int a = 0; a < aps.length; a++)
- {
- System.out.println("Selection: testing source alignPanel : "
- + aps[a].getName());
- if (aps[a].av == source)
- {
- src = aps[a].alignFrame;
- }
+ // should be valid if it just generated an event!
+ src = ((jalview.appletgui.AlignViewport) source).applet.currentAlignFrame;
+
}
}
- else
- {
- // unhandled!
- System.err.println("Unhandled selection source !");
- return;
- }
- String[] seqs = new String[]
- {};
- String[] cols = new String[]
- {};
+ String[] seqs = new String[] {};
+ String[] cols = new String[] {};
int strt = 0, end = (src == null) ? -1 : src.alignPanel.av
.getAlignment().getWidth();
if (seqsel != null && seqsel.getSize() > 0)
{
strt = seqsel.getStartRes();
}
- if (end==-1 || end > seqsel.getEndRes())
+ if (end == -1 || end > seqsel.getEndRes())
{
end = seqsel.getEndRes();
}
}
System.err.println("Relaying selection to jsfunction:" + _listener);
- executeJavascriptFunction( _listener,
- new Object[]
- { src, setid, jvlite.arrayToSeparatorList(seqs),
- jvlite.arrayToSeparatorList(cols) });
+ executeJavascriptFunction(_listener,
+ new Object[] { src, setid, jvlite.arrayToSeparatorList(seqs),
+ jvlite.arrayToSeparatorList(cols) });
} catch (Exception ex)
{
System.err
}
}
-
@Override
public AlignFrame getAlignFrame()
{