JAL-1645 source formatting and organise imports

[jalview.git] / src / jalview / javascript / MouseOverStructureListener.java

diff --git a/src/jalview/javascript/MouseOverStructureListener.java b/src/jalview/javascript/MouseOverStructureListener.java
index 4b1c9ce..2ef957e 100644 (file)
--- a/src/jalview/javascript/MouseOverStructureListener.java
+++ b/src/jalview/javascript/MouseOverStructureListener.java
@@ -20,9 +20,6 @@
  */
 package jalview.javascript;
 
-import java.util.ArrayList;
-import java.util.List;
-
 import jalview.api.AlignmentViewPanel;
 import jalview.api.FeatureRenderer;
 import jalview.api.SequenceRenderer;
@@ -36,6 +33,9 @@ import jalview.structure.StructureMapping;
 import jalview.structure.StructureMappingcommandSet;
 import jalview.structure.StructureSelectionManager;
 
+import java.util.ArrayList;
+import java.util.List;
+
 /**
  * Propagate events involving PDB structures associated with sequences to a
  * javascript function. Generally, the javascript handler is called with a
@@ -154,10 +154,10 @@ public class MouseOverStructureListener extends JSFunctionExec implements
         // field that is interpreted (in 2.8.2) as pdbId?
         // JBPComment: yep - this is right! the Javascript harness uses the
         // absolute pdbFile URI to locate the PDB file in the external viewer
-        executeJavascriptFunction(_listenerfn, new String[]
-        { "mouseover", "" + atom.getPdbFile(),
-                    "" + atom.getChain(),
-            "" + (atom.getPdbResNum()), "" + atom.getAtomIndex() });
+        executeJavascriptFunction(_listenerfn,
+                new String[] { "mouseover", "" + atom.getPdbFile(),
+                    "" + atom.getChain(), "" + (atom.getPdbResNum()),
+                    "" + atom.getAtomIndex() });
       } catch (Exception ex)
       {
         System.err.println("Couldn't execute callback with " + _listenerfn
@@ -173,10 +173,14 @@ public class MouseOverStructureListener extends JSFunctionExec implements
     final Object source = srce;
     StructureSelectionManager ssm = StructureSelectionManager
             .getStructureSelectionManager(jvlite);
-    // if (jvlite.debug)
-    // {
-    // ssm.reportMapping();
-    // }
+
+    if (JalviewLite.debug)
+    {
+      System.err.println(this.getClass().getName() + " modelSet[0]: "
+              + modelSet[0]);
+      ssm.reportMapping();
+    }
+
     if (source instanceof jalview.api.AlignmentViewPanel)
     {
       SequenceI[][] sequence = new SequenceI[modelSet.length][];
@@ -249,8 +253,7 @@ public class MouseOverStructureListener extends JSFunctionExec implements
       {
         jvlite.setJsMessageSet(mclass, mhandle, ccomandset);
         // and notify javascript handler
-        String st[] = new String[]
-        {
+        String st[] = new String[] {
             "colourstruct",
             "" + ((jalview.appletgui.AlignmentPanel) source).av.getViewId(),
             "" + ccomandset.length,