import jalview.structure.StructureSelectionManager;
import jalview.util.HttpUtils;
-import java.io.IOException;
-import java.io.InputStream;
-import java.net.URL;
import java.util.ArrayList;
import java.util.List;
ArrayList<String> pdbfn = new ArrayList<String>();
StructureMappingcommandSet[] colcommands = JmolCommands
.getColourBySequenceCommand(ssm, modelSet, sequence, sr, fr,
- ((AlignmentViewPanel) source).getAlignment());
+ ((AlignmentViewPanel) source).getAlignViewport());
if (colcommands == null)
{
return;
return _listenerfn;
}
- public void finalise()
+ @Override
+ public void finalize() throws Throwable
{
jvlite = null;
super.finalize();