ArrayList<String> pdbfn = new ArrayList<String>();
StructureMappingcommandSet[] colcommands = JmolCommands
.getColourBySequenceCommand(ssm, modelSet, sequence, sr, fr,
- ((AlignmentViewPanel) source).getAlignment());
+ ((AlignmentViewPanel) source).getAlignViewport());
if (colcommands == null)
{
return;
return _listenerfn;
}
+ @Override
public void finalize() throws Throwable
{
jvlite = null;