/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
MessageManager.getString("action.calculate"));
webService.setText(MessageManager.getString("action.web_service"));
JMenuItem selectAllSequenceMenuItem = new JMenuItem(
- MessageManager
- .getString("action.select_all"));
+ MessageManager.getString("action.select_all"));
keyStroke = KeyStroke.getKeyStroke(KeyEvent.VK_A, Toolkit
.getDefaultToolkit().getMenuShortcutKeyMask(), false);
al = new ActionListener()
}
});
- JMenuItem removeRedundancyMenuItem = new JMenuItem(MessageManager
-.getString("action.remove_redundancy"));
+ JMenuItem removeRedundancyMenuItem = new JMenuItem(
+ MessageManager.getString("action.remove_redundancy"));
keyStroke = KeyStroke.getKeyStroke(KeyEvent.VK_D, Toolkit
.getDefaultToolkit().getMenuShortcutKeyMask(), false);
al = new ActionListener()
MessageManager.getString("label.show_last"));
buttonGroup.add(showAutoFirst);
buttonGroup.add(showAutoLast);
- showAutoFirst.setSelected(Cache.getDefault(
- Preferences.SHOW_AUTOCALC_ABOVE, false));
+ final boolean autoFirst = Cache.getDefault(
+ Preferences.SHOW_AUTOCALC_ABOVE, false);
+ showAutoFirst.setSelected(autoFirst);
+ setShowAutoCalculatedAbove(autoFirst);
showAutoFirst.addActionListener(new ActionListener()
{
@Override
JMenuItem invertColSel = new JMenuItem(
MessageManager.getString("action.invert_column_selection"));
- keyStroke = KeyStroke.getKeyStroke(KeyEvent.VK_I,
- Toolkit.getDefaultToolkit().getMenuShortcutKeyMask()
+ keyStroke = KeyStroke.getKeyStroke(KeyEvent.VK_I, Toolkit
+ .getDefaultToolkit().getMenuShortcutKeyMask()
| KeyEvent.ALT_MASK, false);
al = new ActionListener()
{
{
}
+
protected void loadTreeMenuItem_actionPerformed(ActionEvent e)
{
return annotationSortOrder;
}
- protected void setAnnotationSortOrder(SequenceAnnotationOrder annotationSortOrder)
+ protected void setAnnotationSortOrder(
+ SequenceAnnotationOrder annotationSortOrder)
{
this.annotationSortOrder = annotationSortOrder;
}