pickmanager on sequence and alignment position, vamsas pick broadcast and refactor...

[jalview.git] / src / jalview / jbgui / GAlignFrame.java

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index b37e4c1..36378d4 100755 (executable)
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -116,6 +116,7 @@ public class GAlignFrame
   JMenuItem vamsasStore = new JMenuItem();
   protected JMenuItem showTranslation = new JMenuItem();
   protected JMenuItem extractScores = new JMenuItem();
+  protected JMenu showProducts = new JMenu();
   public JMenuItem featureSettings = new JMenuItem();
   JMenuItem fetchSequence = new JMenuItem();
   JMenuItem annotationColour = new JMenuItem();
@@ -1026,7 +1027,16 @@ public class GAlignFrame
         extractScores_actionPerformed(e);
       }
     });
-    extractScores.setVisible(false); // JBPNote: TODO: make gui for regex based score extraction
+    extractScores.setVisible(true); // JBPNote: TODO: make gui for regex based score extraction
+    showProducts.setText("Get Cross References");
+    /*showProducts.addActionListener(new ActionListener()
+    {
+
+      public void actionPerformed(ActionEvent e)
+      {
+        showProducts_actionPerformed(e);
+      }
+    });*/
     featureSettings.setText("Feature Settings...");
     featureSettings.addActionListener(new ActionListener()
     {
@@ -1362,6 +1372,7 @@ public class GAlignFrame
     calculateMenu.add(PCAMenuItem);
     calculateMenu.addSeparator();
     calculateMenu.add(showTranslation);
+    calculateMenu.add(showProducts);
     calculateMenu.add(autoCalculate);
     calculateMenu.addSeparator();
     calculateMenu.add(extractScores);
@@ -1412,6 +1423,12 @@ public class GAlignFrame
     selectMenu.add(deleteGroups);
   }
 
+  protected void showProducts_actionPerformed(ActionEvent e)
+  {
+    // TODO Auto-generated method stub
+    
+  }
+
   protected void buildSortByAnnotationScoresMenu()
   {
   }