SequenceFeature display added

[jalview.git] / src / jalview / jbgui / GAlignFrame.java

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 484287c..764f5cf 100755 (executable)
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -80,7 +80,7 @@ public class GAlignFrame extends JInternalFrame
   JMenuItem findMenuItem = new JMenuItem();\r
   JMenu searchMenu = new JMenu();\r
   protected JCheckBoxMenuItem abovePIDThreshold = new JCheckBoxMenuItem();\r
-  protected JCheckBoxMenuItem secondaryStructure = new JCheckBoxMenuItem();\r
+  protected JCheckBoxMenuItem sequenceFeatures = new JCheckBoxMenuItem();\r
   protected JRadioButtonMenuItem nucleotideColour = new JRadioButtonMenuItem();\r
   JMenuItem deleteGroups = new JMenuItem();\r
   public GAlignFrame()\r
@@ -544,7 +544,6 @@ public class GAlignFrame extends JInternalFrame
         noColourmenuItem_actionPerformed(e);\r
       }\r
     });\r
-    wrapMenuItem.setEnabled(false);\r
     wrapMenuItem.setText("Wrap alignment");\r
     wrapMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
@@ -594,13 +593,13 @@ public class GAlignFrame extends JInternalFrame
         abovePIDThreshold_actionPerformed(e);\r
       }\r
     });\r
-    secondaryStructure.setSelected(true);\r
-    secondaryStructure.setText("Secondary Structure");\r
-    secondaryStructure.addActionListener(new ActionListener()\r
+    sequenceFeatures.setSelected(true);\r
+    sequenceFeatures.setText("Sequence Features");\r
+    sequenceFeatures.addActionListener(new ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent actionEvent)\r
       {\r
-        secondaryStructure_actionPerformed(actionEvent);\r
+        sequenceFeatures_actionPerformed(actionEvent);\r
       }\r
     });\r
     nucleotideColour.setText("Nucleotide colours");\r
@@ -661,7 +660,7 @@ public class GAlignFrame extends JInternalFrame
     viewMenu.add(renderGapsMenuItem);\r
     viewMenu.add(consensusGraphMenuItem);\r
     viewMenu.add(overviewMenuItem);\r
-    viewMenu.add(secondaryStructure);\r
+    viewMenu.add(sequenceFeatures);\r
     colourMenu.add(noColourmenuItem);\r
     colourMenu.add(clustalColour);\r
     colourMenu.add(zappoColour);\r
@@ -993,7 +992,7 @@ public class GAlignFrame extends JInternalFrame
 \r
   }\r
 \r
-  public void secondaryStructure_actionPerformed(ActionEvent actionEvent)\r
+  public void sequenceFeatures_actionPerformed(ActionEvent actionEvent)\r
   {\r
 \r
   }\r