a flauss changes

[jalview.git] / src / jalview / jbgui / GAlignFrame.java

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 7370995..b4cd276 100755 (executable)
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -274,7 +274,7 @@ public class GAlignFrame extends JInternalFrame
         viewTextMenuItem_actionPerformed(e);\r
       }\r
     });\r
-    sortPairwiseMenuItem.setText("By Pairwise Identity");\r
+    sortPairwiseMenuItem.setText("by Pairwise Identity");\r
     sortPairwiseMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -282,7 +282,7 @@ public class GAlignFrame extends JInternalFrame
         sortPairwiseMenuItem_actionPerformed(e);\r
       }\r
     });\r
-    sortIDMenuItem.setText("By ID");\r
+    sortIDMenuItem.setText("by ID");\r
     sortIDMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -290,7 +290,7 @@ public class GAlignFrame extends JInternalFrame
         sortIDMenuItem_actionPerformed(e);\r
       }\r
     });\r
-    sortGroupMenuItem.setText("By Group");\r
+    sortGroupMenuItem.setText("by Group");\r
     sortGroupMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -691,6 +691,7 @@ public class GAlignFrame extends JInternalFrame
       }\r
     });\r
     fullSeqId.setText("Show Full Sequence ID");\r
+    fullSeqId.setState(true);\r
     fullSeqId.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -810,13 +811,12 @@ public class GAlignFrame extends JInternalFrame
     editMenu.add(removeRedundancyMenuItem);\r
     searchMenu.add(findMenuItem);\r
     viewMenu.add(font);\r
-    viewMenu.add(fullSeqId);\r
     viewMenu.addSeparator();\r
     viewMenu.add(wrapMenuItem);\r
+    viewMenu.add(fullSeqId);\r
     viewMenu.add(scaleAbove);\r
     viewMenu.add(scaleLeft);\r
     viewMenu.add(scaleRight);\r
-    viewMenu.addSeparator();\r
     viewMenu.add(viewBoxesMenuItem);\r
     viewMenu.add(viewTextMenuItem);\r
     viewMenu.add(colourTextMenuItem);\r
@@ -826,8 +826,8 @@ public class GAlignFrame extends JInternalFrame
     viewMenu.addSeparator();\r
     viewMenu.add(overviewMenuItem);\r
     colourMenu.add(applyToAllGroups);\r
-    colourMenu.add(noColourmenuItem);\r
     colourMenu.addSeparator();\r
+    colourMenu.add(noColourmenuItem);\r
     colourMenu.add(clustalColour);\r
     colourMenu.add(BLOSUM62Colour);\r
     colourMenu.add(PIDColour);\r