/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.jbgui;
-import java.awt.*;
-import javax.swing.*;
-import javax.swing.border.*;
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.Dimension;
+
+import javax.swing.BorderFactory;
+import javax.swing.ButtonGroup;
+import javax.swing.JPanel;
+import javax.swing.JScrollBar;
+import javax.swing.JScrollPane;
+import javax.swing.border.Border;
+@SuppressWarnings("serial")
public class GAlignmentPanel extends JPanel
{
- protected JPanel sequenceHolderPanel = new JPanel();
protected JScrollBar vscroll = new JScrollBar();
- protected JScrollBar hscroll = new JScrollBar();
- protected JPanel seqPanelHolder = new JPanel();
+
+ protected JScrollBar hscroll = new JScrollBar();
+
BorderLayout borderLayout1 = new BorderLayout();
+
BorderLayout borderLayout3 = new BorderLayout();
- protected JPanel scalePanelHolder = new JPanel();
- protected JPanel idPanelHolder = new JPanel();
+
BorderLayout borderLayout5 = new BorderLayout();
- protected JPanel idSpaceFillerPanel1 = new JPanel();
- public JPanel annotationSpaceFillerHolder = new JPanel();
+
BorderLayout borderLayout6 = new BorderLayout();
+
ButtonGroup buttonGroup1 = new ButtonGroup();
+
BorderLayout borderLayout7 = new BorderLayout();
- JPanel hscrollHolder = new JPanel();
+
BorderLayout borderLayout10 = new BorderLayout();
- protected JPanel hscrollFillerPanel = new JPanel();
+
BorderLayout borderLayout11 = new BorderLayout();
+
public JScrollPane annotationScroller = new JScrollPane();
+
Border border1;
+
BorderLayout borderLayout4 = new BorderLayout();
+ static JPanel newJPanel()
+ { // BH 2019
+ JPanel p = new JPanel();
+ // leaving this in, as it prevents
+ // the checkerboard business, despite how
+ // funky that looks. Remove if you want to.
+ p.setBackground(Color.white);
+ return p;
+ }
+
+ protected JPanel sequenceHolderPanel = newJPanel();
+
+ protected JPanel seqPanelHolder = newJPanel();
+
+ protected JPanel scalePanelHolder = newJPanel();
+
+ public JPanel idPanelHolder = newJPanel();
+
+ protected JPanel idSpaceFillerPanel1 = newJPanel();
+
+ public JPanel annotationSpaceFillerHolder = newJPanel();
+
+ protected JPanel hscrollFillerPanel = newJPanel();
+
+ JPanel hscrollHolder = newJPanel();
+
public GAlignmentPanel()
{
try
{
jbInit();
- }
- catch(Exception e)
+ } catch (Exception e)
{
e.printStackTrace();
}
}
+
private void jbInit() throws Exception
{
- border1 = BorderFactory.createLineBorder(Color.gray,1);
+ // annotationScroller.setBackground(Color.white); // BH 2019
+
+ border1 = BorderFactory.createLineBorder(Color.gray, 1);
idPanelHolder.setBorder(null);
idPanelHolder.setPreferredSize(new Dimension(70, 10));
this.setLayout(borderLayout7);
- sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));
+ sequenceHolderPanel
+ .setMaximumSize(new Dimension(2147483647, 2147483647));
sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
sequenceHolderPanel.setLayout(borderLayout3);
annotationScroller.setBorder(null);
annotationScroller.setPreferredSize(new Dimension(10, 80));
this.setPreferredSize(new Dimension(220, 166));
- this.setRequestFocusEnabled(true);
- sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
- sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
+
+ sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
+ sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
seqPanelHolder.add(vscroll, BorderLayout.EAST);
sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
- // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
+
+ // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
this.add(idPanelHolder, BorderLayout.WEST);
- idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
+ idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
- this.add(hscrollHolder, BorderLayout.SOUTH);
+ this.add(hscrollHolder, BorderLayout.SOUTH);
hscrollHolder.add(hscroll, BorderLayout.CENTER);
- hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
- this.add(sequenceHolderPanel, BorderLayout.CENTER);
+ hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
+ this.add(sequenceHolderPanel, BorderLayout.CENTER);
}
-
+ public JPanel getIdSpaceFillerPanel1()
+ {
+ return idSpaceFillerPanel1;
+ }
}