SetSecondaryPanel

[jalview.git] / src / jalview / jbgui / GAlignmentPanel.java

diff --git a/src/jalview/jbgui/GAlignmentPanel.java b/src/jalview/jbgui/GAlignmentPanel.java
index 4f6e29c..58957b3 100755 (executable)
--- a/src/jalview/jbgui/GAlignmentPanel.java
+++ b/src/jalview/jbgui/GAlignmentPanel.java
@@ -33,6 +33,10 @@ public class GAlignmentPanel extends JPanel
   BorderLayout borderLayout7 = new BorderLayout();
   JPanel jPanel1 = new JPanel();
   FlowLayout flowLayout1 = new FlowLayout();
+  JPanel jPanel3 = new JPanel();
+  protected JPanel secondaryPanelHolder = new JPanel();
+  BorderLayout borderLayout8 = new BorderLayout();
+  BorderLayout borderLayout9 = new BorderLayout();
 
   public GAlignmentPanel()
   {
@@ -78,12 +82,17 @@ public class GAlignmentPanel extends JPanel
     jPanel1.setLayout(flowLayout1);
     flowLayout1.setHgap(0);
     flowLayout1.setVgap(0);
-    sequenceHolderPanel.add(scorePanelHolder, BorderLayout.SOUTH);
+    jPanel3.setLayout(borderLayout9);
+    secondaryPanelHolder.setBackground(Color.cyan);
+    secondaryPanelHolder.setLayout(borderLayout8);
     sequenceHolderPanel.add(scalePanelHolder,  BorderLayout.NORTH);
     sequenceHolderPanel.add(seqPanelHolder,  BorderLayout.CENTER);
     this.add(jPanel2, BorderLayout.CENTER);
     jPanel2.add(sequenceHolderPanel, BorderLayout.CENTER);
     seqPanelHolder.add(vscroll, BorderLayout.EAST);
+    sequenceHolderPanel.add(jPanel3,  BorderLayout.SOUTH);
+    jPanel3.add(scorePanelHolder, BorderLayout.CENTER);
+    jPanel3.add(secondaryPanelHolder,  BorderLayout.SOUTH);
     this.add(idPanelHolder, BorderLayout.WEST);
     idPanelHolder.add(idSpaceFillerPanel1,  BorderLayout.NORTH);
     idPanelHolder.add(idSpaceFillerPanel,  BorderLayout.SOUTH);