-/********************
- * 2004 Jalview Reengineered
- * Barton Group
- * Dundee University
- *
- * AM Waterhouse
- *******************/
-
-package jalview.jbgui;
-
-import java.awt.*;
-import javax.swing.*;
-
-public class GAlignmentPanel extends JPanel
-{
- protected JPanel sequenceHolderPanel = new JPanel();
- protected JScrollBar vscroll = new JScrollBar();
- protected JScrollBar hscroll = new JScrollBar();
- protected JPanel seqPanelHolder = new JPanel();
- BorderLayout borderLayout1 = new BorderLayout();
- BorderLayout borderLayout3 = new BorderLayout();
- JPanel jPanel2 = new JPanel();
- BorderLayout borderLayout2 = new BorderLayout();
- protected JPanel scorePanelHolder = new JPanel();
- protected JPanel scalePanelHolder = new JPanel();
- protected JPanel idPanelHolder = new JPanel();
- BorderLayout borderLayout5 = new BorderLayout();
- protected JPanel idSpaceFillerPanel1 = new JPanel();
- protected JPanel idSpaceFillerPanel = new JPanel();
- BorderLayout borderLayout4 = new BorderLayout();
- BorderLayout borderLayout6 = new BorderLayout();
- ButtonGroup buttonGroup1 = new ButtonGroup();
- BorderLayout borderLayout7 = new BorderLayout();
- JPanel jPanel1 = new JPanel();
- FlowLayout flowLayout1 = new FlowLayout();
-
- public GAlignmentPanel()
- {
- try
- {
- jbInit();
- }
- catch(Exception e)
- {
- e.printStackTrace();
- }
- }
- private void jbInit() throws Exception
- {
- idPanelHolder.setBorder(null);
- idPanelHolder.setPreferredSize(new Dimension(70, 10));
- this.setLayout(borderLayout7);
- sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));
- sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
- sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
- sequenceHolderPanel.setLayout(borderLayout3);
- seqPanelHolder.setLayout(borderLayout1);
- jPanel2.setBackground(new Color(212, 208, 230));
- jPanel2.setBorder(null);
- jPanel2.setLayout(borderLayout2);
- scalePanelHolder.setBackground(Color.white);
- scalePanelHolder.setMinimumSize(new Dimension(10, 80));
- scalePanelHolder.setPreferredSize(new Dimension(10, 30));
- scalePanelHolder.setLayout(borderLayout6);
- scorePanelHolder.setBackground(Color.white);
- scorePanelHolder.setPreferredSize(new Dimension(10, 80));
- scorePanelHolder.setLayout(borderLayout4);
- idPanelHolder.setLayout(borderLayout5);
- idSpaceFillerPanel1.setBackground(Color.white);
- idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
- idSpaceFillerPanel.setBackground(Color.white);
- idSpaceFillerPanel.setPreferredSize(new Dimension(10, 80));
- hscroll.setOrientation(JScrollBar.HORIZONTAL);
- hscroll.setMinimumSize(new Dimension(250, 16));
- hscroll.setPreferredSize(new Dimension(250, 16));
- vscroll.setEnabled(true);
- jPanel1.setBackground(new Color(220, 220, 220));
- jPanel1.setLayout(flowLayout1);
- flowLayout1.setHgap(0);
- flowLayout1.setVgap(0);
- sequenceHolderPanel.add(scorePanelHolder, BorderLayout.SOUTH);
- sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
- sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
- this.add(jPanel2, BorderLayout.CENTER);
- jPanel2.add(sequenceHolderPanel, BorderLayout.CENTER);
- seqPanelHolder.add(vscroll, BorderLayout.EAST);
- this.add(idPanelHolder, BorderLayout.WEST);
- idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
- idPanelHolder.add(idSpaceFillerPanel, BorderLayout.SOUTH);
- this.add(jPanel1, BorderLayout.SOUTH);
- jPanel1.add(hscroll, null);
- }
-
-
-}
+/*\r
+ * Jalview - A Sequence Alignment Editor and Viewer\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ *\r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ *\r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+ * GNU General Public License for more details.\r
+ *\r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
+ */\r
+package jalview.jbgui;\r
+\r
+import java.awt.*;\r
+import javax.swing.*;\r
+import javax.swing.border.*;\r
+\r
+public class GAlignmentPanel\r
+ extends JPanel\r
+{\r
+ protected JPanel sequenceHolderPanel = new JPanel();\r
+ protected JScrollBar vscroll = new JScrollBar();\r
+ protected JScrollBar hscroll = new JScrollBar();\r
+ protected JPanel seqPanelHolder = new JPanel();\r
+ BorderLayout borderLayout1 = new BorderLayout();\r
+ BorderLayout borderLayout3 = new BorderLayout();\r
+ protected JPanel scalePanelHolder = new JPanel();\r
+ protected JPanel idPanelHolder = new JPanel();\r
+ BorderLayout borderLayout5 = new BorderLayout();\r
+ protected JPanel idSpaceFillerPanel1 = new JPanel();\r
+ public JPanel annotationSpaceFillerHolder = new JPanel();\r
+ BorderLayout borderLayout6 = new BorderLayout();\r
+ ButtonGroup buttonGroup1 = new ButtonGroup();\r
+ BorderLayout borderLayout7 = new BorderLayout();\r
+ JPanel hscrollHolder = new JPanel();\r
+ BorderLayout borderLayout10 = new BorderLayout();\r
+ protected JPanel hscrollFillerPanel = new JPanel();\r
+ BorderLayout borderLayout11 = new BorderLayout();\r
+ public JScrollPane annotationScroller = new JScrollPane();\r
+ Border border1;\r
+ BorderLayout borderLayout4 = new BorderLayout();\r
+\r
+ public GAlignmentPanel()\r
+ {\r
+ try\r
+ {\r
+ jbInit();\r
+ }\r
+ catch (Exception e)\r
+ {\r
+ e.printStackTrace();\r
+ }\r
+ }\r
+\r
+ private void jbInit()\r
+ throws Exception\r
+ {\r
+ border1 = BorderFactory.createLineBorder(Color.gray, 1);\r
+ idPanelHolder.setBorder(null);\r
+ idPanelHolder.setPreferredSize(new Dimension(70, 10));\r
+ this.setLayout(borderLayout7);\r
+ sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));\r
+ sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));\r
+ sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));\r
+ sequenceHolderPanel.setLayout(borderLayout3);\r
+ seqPanelHolder.setLayout(borderLayout1);\r
+ scalePanelHolder.setBackground(Color.white);\r
+ scalePanelHolder.setMinimumSize(new Dimension(10, 80));\r
+ scalePanelHolder.setPreferredSize(new Dimension(10, 30));\r
+ scalePanelHolder.setLayout(borderLayout6);\r
+ idPanelHolder.setLayout(borderLayout5);\r
+ idSpaceFillerPanel1.setBackground(Color.white);\r
+ idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));\r
+ idSpaceFillerPanel1.setLayout(borderLayout11);\r
+ annotationSpaceFillerHolder.setBackground(Color.white);\r
+ annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));\r
+ annotationSpaceFillerHolder.setLayout(borderLayout4);\r
+ hscroll.setOrientation(JScrollBar.HORIZONTAL);\r
+ hscrollHolder.setLayout(borderLayout10);\r
+ hscrollFillerPanel.setBackground(Color.white);\r
+ hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));\r
+ hscrollHolder.setBackground(Color.white);\r
+ annotationScroller.setBorder(null);\r
+ annotationScroller.setPreferredSize(new Dimension(10, 80));\r
+ this.setPreferredSize(new Dimension(220, 166));\r
+\r
+ sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);\r
+ sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);\r
+ seqPanelHolder.add(vscroll, BorderLayout.EAST);\r
+ sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);\r
+\r
+ // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);\r
+ this.add(idPanelHolder, BorderLayout.WEST);\r
+ idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);\r
+ idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);\r
+ this.add(hscrollHolder, BorderLayout.SOUTH);\r
+ hscrollHolder.add(hscroll, BorderLayout.CENTER);\r
+ hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);\r
+ this.add(sequenceHolderPanel, BorderLayout.CENTER);\r
+ }\r
+}\r