-/********************
- * 2004 Jalview Reengineered
- * Barton Group
- * Dundee University
- *
- * AM Waterhouse
- *******************/
-
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
+ * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ */
package jalview.jbgui;
-import javax.swing.*;
-import java.awt.event.*;
import java.awt.*;
+import java.awt.event.*;
+import javax.swing.*;
+/**
+ * DOCUMENT ME!
+ *
+ * @author $author$
+ * @version $Revision$
+ */
public class GDesktop extends JFrame
{
- JMenuBar DesktopMenubar = new JMenuBar();
+ protected static JMenu windowMenu = new JMenu();
+
+ JMenuBar desktopMenubar = new JMenuBar();
+
JMenu FileMenu = new JMenu();
+
JMenu HelpMenu = new JMenu();
+
+ protected JMenu VamsasMenu = new JMenu();
+
+ protected JMenu VamsasStMenu = new JMenu();
+
JMenuItem inputLocalFileMenuItem = new JMenuItem();
+
JMenuItem inputURLMenuItem = new JMenuItem();
+
JMenuItem inputTextboxMenuItem = new JMenuItem();
+
JMenuItem quit = new JMenuItem();
+
JMenuItem aboutMenuItem = new JMenuItem();
+
JMenuItem documentationMenuItem = new JMenuItem();
- JMenuItem colourIndexMenuItem = new JMenuItem();
+
FlowLayout flowLayout1 = new FlowLayout();
- protected static JMenu windowMenu = new JMenu();
+
+ protected JMenu toolsMenu = new JMenu();
+
+ JMenuItem preferences = new JMenuItem();
+
+ JMenuItem saveState = new JMenuItem();
+
+ JMenuItem loadState = new JMenuItem();
+
+ JMenu inputMenu = new JMenu();
+
+ protected JMenuItem vamsasStart = new JMenuItem();
+
+ protected JMenuItem vamsasImport = new JMenuItem();
+
+ protected JMenuItem vamsasSave = new JMenuItem();
+
+ JMenuItem inputSequence = new JMenuItem();
+
+ protected JMenuItem vamsasStop = new JMenuItem();
+
+ JMenuItem closeAll = new JMenuItem();
+
+ JMenuItem raiseRelated = new JMenuItem();
+
+ JMenuItem minimizeAssociated = new JMenuItem();
+
+ protected JCheckBoxMenuItem showMemusage = new JCheckBoxMenuItem();
+
+ JMenuItem garbageCollect = new JMenuItem();
+
+ protected JCheckBoxMenuItem showConsole = new JCheckBoxMenuItem();
+
+ /**
+ * Creates a new GDesktop object.
+ */
public GDesktop()
{
try
{
jbInit();
- this.setJMenuBar(DesktopMenubar);
- }
- catch(Exception e)
+ this.setJMenuBar(desktopMenubar);
+ } catch (Exception e)
{
e.printStackTrace();
}
+ if (!new jalview.util.Platform().isAMac())
+ {
+ FileMenu.setMnemonic('F');
+ inputLocalFileMenuItem.setMnemonic('L');
+ VamsasMenu.setMnemonic('V');
+ inputURLMenuItem.setMnemonic('U');
+ inputTextboxMenuItem.setMnemonic('C');
+ quit.setMnemonic('Q');
+ saveState.setMnemonic('S');
+ loadState.setMnemonic('L');
+ inputMenu.setMnemonic('I');
+ }
}
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @throws Exception
+ * DOCUMENT ME!
+ */
private void jbInit() throws Exception
{
- FileMenu.setMnemonic('F');
FileMenu.setText("File");
HelpMenu.setText("Help");
- inputLocalFileMenuItem.setMnemonic('L');
- inputLocalFileMenuItem.setText("Input Alignment From Local File");
- inputLocalFileMenuItem.addActionListener(new java.awt.event.ActionListener()
+ VamsasMenu.setText("Vamsas");
+ VamsasMenu.setToolTipText("Share data with other vamsas applications.");
+ VamsasStMenu.setText("Connect to");
+ VamsasStMenu.setToolTipText("Join an existing vamsas session");
+ inputLocalFileMenuItem.setText("from File");
+ inputLocalFileMenuItem.setAccelerator(javax.swing.KeyStroke
+ .getKeyStroke(java.awt.event.KeyEvent.VK_O, Toolkit
+ .getDefaultToolkit().getMenuShortcutKeyMask(), false));
+ inputLocalFileMenuItem
+ .addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ inputLocalFileMenuItem_actionPerformed(null);
+ }
+ });
+ inputURLMenuItem.setText("from URL");
+ inputURLMenuItem.addActionListener(new java.awt.event.ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- inputLocalFileMenuItem_actionPerformed(e);
+ inputURLMenuItem_actionPerformed(null);
}
});
- inputURLMenuItem.setMnemonic('U');
- inputURLMenuItem.setText("Input Alignment From URL");
- inputURLMenuItem.addActionListener(new java.awt.event.ActionListener()
+ inputTextboxMenuItem.setText("from Textbox");
+ inputTextboxMenuItem
+ .addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ inputTextboxMenuItem_actionPerformed(null);
+ }
+ });
+ quit.setText("Quit");
+ quit.addActionListener(new java.awt.event.ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- inputURLMenuItem_actionPerformed(e);
+ quit();
}
});
- inputTextboxMenuItem.setMnemonic('T');
- inputTextboxMenuItem.setText("Input Alignment via Textbox");
- inputTextboxMenuItem.addActionListener(new java.awt.event.ActionListener()
+ aboutMenuItem.setText("About");
+ aboutMenuItem.addActionListener(new java.awt.event.ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- inputTextboxMenuItem_actionPerformed(e);
+ aboutMenuItem_actionPerformed(e);
}
});
- quit.setMnemonic('Q');
- quit.setText("Quit");
- quit.addActionListener(new java.awt.event.ActionListener()
+ documentationMenuItem.setText("Documentation");
+ documentationMenuItem.setAccelerator(javax.swing.KeyStroke
+ .getKeyStroke(java.awt.event.KeyEvent.VK_F1, 0, false));
+ documentationMenuItem
+ .addActionListener(new java.awt.event.ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ documentationMenuItem_actionPerformed(e);
+ }
+ });
+ this.getContentPane().setLayout(flowLayout1);
+ windowMenu.setText("Window");
+ preferences.setText("Preferences...");
+ preferences.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- quit_actionPerformed(e);
+ preferences_actionPerformed(e);
}
});
- aboutMenuItem.setText("About");
- aboutMenuItem.addActionListener(new java.awt.event.ActionListener()
+ toolsMenu.setText("Tools");
+ saveState.setText("Save Project");
+ saveState.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- aboutMenuItem_actionPerformed(e);
+ saveState_actionPerformed(e);
}
});
- documentationMenuItem.setText("Documentation");
- documentationMenuItem.addActionListener(new java.awt.event.ActionListener()
+ loadState.setText("Load Project");
+ loadState.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- documentationMenuItem_actionPerformed(e);
+ loadState_actionPerformed(e);
}
});
- colourIndexMenuItem.addActionListener(new java.awt.event.ActionListener()
+ inputMenu.setText("Input Alignment");
+ vamsasStart.setText("New Vamsas Session...");
+ vamsasStart.setVisible(false);
+ vamsasStart.addActionListener(new ActionListener()
{
public void actionPerformed(ActionEvent e)
{
- colourIndexMenuItem_actionPerformed(e);
+ vamsasStart_actionPerformed(e);
}
});
- colourIndexMenuItem.setText("Colour Scheme Key");
- this.getContentPane().setLayout(flowLayout1);
- windowMenu.setText("Window");
- DesktopMenubar.add(FileMenu);
- DesktopMenubar.add(HelpMenu);
- DesktopMenubar.add(windowMenu);
- FileMenu.add(inputLocalFileMenuItem);
- FileMenu.add(inputURLMenuItem);
- FileMenu.add(inputTextboxMenuItem);
+ vamsasImport.setText("Load Vamsas Session...");
+ vamsasImport.setVisible(false);
+ vamsasImport.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ vamsasImport_actionPerformed(e);
+ }
+ });
+ vamsasSave.setText("Save Vamsas Session...");
+ vamsasSave.setVisible(false);
+ vamsasSave.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ vamsasSave_actionPerformed(e);
+ }
+ });
+ inputSequence.setText("Fetch Sequence(s)...");
+ inputSequence.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ inputSequence_actionPerformed(e);
+ }
+ });
+ vamsasStop.setText("Stop Vamsas Session");
+ vamsasStop.setVisible(false);
+ vamsasStop.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ vamsasStop_actionPerformed(e);
+ }
+ });
+ closeAll.setText("Close All");
+ closeAll.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ closeAll_actionPerformed(e);
+ }
+ });
+ raiseRelated.setText("Raise Associated Windows");
+ raiseRelated.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ raiseRelated_actionPerformed(e);
+ }
+ });
+ minimizeAssociated.setText("Minimize Associated Windows");
+ minimizeAssociated.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ minimizeAssociated_actionPerformed(e);
+ }
+ });
+ garbageCollect.setText("Collect Garbage");
+ garbageCollect.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ garbageCollect_actionPerformed(e);
+ }
+ });
+ showMemusage.setText("Show Memory Usage");
+ showMemusage.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ showMemusage_actionPerformed(e);
+ }
+ });
+ showConsole.setText("Show Java Console");
+ showConsole.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent e)
+ {
+ showConsole_actionPerformed(e);
+ }
+ });
+ desktopMenubar.add(FileMenu);
+ desktopMenubar.add(toolsMenu);
+ VamsasMenu.setVisible(false);
+ desktopMenubar.add(VamsasMenu);
+ desktopMenubar.add(HelpMenu);
+ desktopMenubar.add(windowMenu);
+ FileMenu.add(inputMenu);
+ FileMenu.add(inputSequence);
+ FileMenu.addSeparator();
+ FileMenu.add(saveState);
+ FileMenu.add(loadState);
FileMenu.addSeparator();
FileMenu.add(quit);
- HelpMenu.add(colourIndexMenuItem);
HelpMenu.add(aboutMenuItem);
HelpMenu.add(documentationMenuItem);
+ VamsasMenu.add(VamsasStMenu);
+ VamsasStMenu.setVisible(false);
+ VamsasMenu.add(vamsasStart);
+ VamsasMenu.add(vamsasImport);
+ VamsasMenu.add(vamsasSave);
+ VamsasMenu.add(vamsasStop);
+ toolsMenu.add(preferences);
+ toolsMenu.add(showMemusage);
+ toolsMenu.add(showConsole);
+ toolsMenu.add(garbageCollect);
+ inputMenu.add(inputLocalFileMenuItem);
+ inputMenu.add(inputURLMenuItem);
+ inputMenu.add(inputTextboxMenuItem);
+ windowMenu.add(closeAll);
+ windowMenu.add(raiseRelated);
+ windowMenu.add(minimizeAssociated);
+ windowMenu.addSeparator();
+ // inputMenu.add(vamsasLoad);
+ }
+
+ protected void showConsole_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void showMemusage_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void garbageCollect_actionPerformed(ActionEvent e)
+ {
+ // TODO Auto-generated method stub
+
+ }
+
+ protected void vamsasStMenu_actionPerformed()
+ {
}
- protected void inputLocalFileMenuItem_actionPerformed(ActionEvent e)
- { }
+ public void vamsasSave_actionPerformed(ActionEvent e)
+ {
+ }
- protected void inputURLMenuItem_actionPerformed(ActionEvent e)
- { }
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ protected void inputLocalFileMenuItem_actionPerformed(
+ jalview.gui.AlignViewport av)
+ {
+ }
- protected void inputTextboxMenuItem_actionPerformed(ActionEvent e)
- { }
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ protected void inputURLMenuItem_actionPerformed(
+ jalview.gui.AlignViewport av)
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ protected void inputTextboxMenuItem_actionPerformed(
+ jalview.gui.AlignViewport av)
+ {
+ }
- protected void quit_actionPerformed(ActionEvent e)
- { }
+ /**
+ * DOCUMENT ME!
+ */
+ protected void quit()
+ {
+ }
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
protected void aboutMenuItem_actionPerformed(ActionEvent e)
- { }
+ {
+ }
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
protected void documentationMenuItem_actionPerformed(ActionEvent e)
- { }
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ public void SaveState_actionPerformed(ActionEvent e)
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ protected void preferences_actionPerformed(ActionEvent e)
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ public void saveState_actionPerformed(ActionEvent e)
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ public void loadState_actionPerformed(ActionEvent e)
+ {
+ }
+
+ /**
+ * DOCUMENT ME!
+ *
+ * @param e
+ * DOCUMENT ME!
+ */
+ public void loadJalviewAlign_actionPerformed(ActionEvent e)
+ {
+ }
+
+ public void vamsasStart_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void inputSequence_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void vamsasStop_actionPerformed(ActionEvent e)
+ {
+
+ }
- protected void colourIndexMenuItem_actionPerformed(ActionEvent e)
+ public void closeAll_actionPerformed(ActionEvent e)
{
}
+
+ public void raiseRelated_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void minimizeAssociated_actionPerformed(ActionEvent e)
+ {
+
+ }
+
+ public void vamsasImport_actionPerformed(ActionEvent e)
+ {
+ }
}