formatting

[jalview.git] / src / jalview / jbgui / GPCAPanel.java

diff --git a/src/jalview/jbgui/GPCAPanel.java b/src/jalview/jbgui/GPCAPanel.java
index c0905a8..337a23b 100755 (executable)
--- a/src/jalview/jbgui/GPCAPanel.java
+++ b/src/jalview/jbgui/GPCAPanel.java
@@ -38,9 +38,9 @@ public class GPCAPanel extends JInternalFrame
   protected JComboBox yCombobox = new JComboBox();
 
   protected JComboBox zCombobox = new JComboBox();
-  
+
   protected JButton resetButton = new JButton();
-  
+
   FlowLayout flowLayout1 = new FlowLayout();
 
   BorderLayout borderLayout1 = new BorderLayout();
@@ -73,13 +73,20 @@ public class GPCAPanel extends JInternalFrame
 
   protected JMenu associateViewsMenu = new JMenu();
 
-  protected JMenu calcSettings=new JMenu();
-  protected JCheckBoxMenuItem nuclSetting=new JCheckBoxMenuItem();
-  protected JCheckBoxMenuItem protSetting=new JCheckBoxMenuItem();
-  
+  protected JMenu calcSettings = new JMenu();
+
+  protected JCheckBoxMenuItem nuclSetting = new JCheckBoxMenuItem();
+
+  protected JCheckBoxMenuItem protSetting = new JCheckBoxMenuItem();
+
+  protected JCheckBoxMenuItem jvVersionSetting = new JCheckBoxMenuItem();
+
   protected JLabel statusBar = new JLabel();
+
   protected GridLayout statusPanelLayout = new GridLayout();
-  protected JPanel statusPanel=new JPanel();
+
+  protected JPanel statusPanel = new JPanel();
+
   public GPCAPanel()
   {
     try
@@ -136,7 +143,7 @@ public class GPCAPanel extends JInternalFrame
         xCombobox_actionPerformed(e);
       }
     });
-    resetButton.setFont(new java.awt.Font("Verdana",0,12));
+    resetButton.setFont(new java.awt.Font("Verdana", 0, 12));
     resetButton.setText("Reset");
     resetButton.addActionListener(new java.awt.event.ActionListener()
     {
@@ -242,7 +249,7 @@ public class GPCAPanel extends JInternalFrame
     protSetting.setText("Protein matrix");
     nuclSetting.addActionListener(new ActionListener()
     {
-      
+
       @Override
       public void actionPerformed(ActionEvent arg0)
       {
@@ -251,19 +258,30 @@ public class GPCAPanel extends JInternalFrame
     });
     protSetting.addActionListener(new ActionListener()
     {
-      
+
       @Override
       public void actionPerformed(ActionEvent arg0)
       {
         protSetting_actionPerfomed(arg0);
       }
-    });calcSettings.add(nuclSetting);
+    });
+    jvVersionSetting.setText("Jalview PCA Calculation");
+    jvVersionSetting.addActionListener(new ActionListener()
+    {
+      @Override
+      public void actionPerformed(ActionEvent arg0)
+      {
+        jvVersionSetting_actionPerfomed(arg0);
+      }
+    });
+    calcSettings.add(jvVersionSetting);
+    calcSettings.add(nuclSetting);
     calcSettings.add(protSetting);
     statusPanel.setLayout(statusPanelLayout);
-    statusBar.setFont(new java.awt.Font("Verdana",0,12));
-    //statusPanel.setBackground(Color.lightGray);
-    //statusBar.setBackground(Color.lightGray);
-    //statusPanel.add(statusBar, null);
+    statusBar.setFont(new java.awt.Font("Verdana", 0, 12));
+    // statusPanel.setBackground(Color.lightGray);
+    // statusBar.setBackground(Color.lightGray);
+    // statusPanel.add(statusBar, null);
     JPanel panelBar = new JPanel(new BorderLayout());
     panelBar.add(jPanel2, BorderLayout.NORTH);
     panelBar.add(statusPanel, BorderLayout.SOUTH);
@@ -294,19 +312,19 @@ public class GPCAPanel extends JInternalFrame
   protected void resetButton_actionPerformed(ActionEvent e)
   {
     // TODO Auto-generated method stub
-    
+
   }
 
   protected void protSetting_actionPerfomed(ActionEvent arg0)
   {
     // TODO Auto-generated method stub
-    
+
   }
 
   protected void nuclSetting_actionPerfomed(ActionEvent arg0)
   {
     // TODO Auto-generated method stub
-    
+
   }
 
   protected void outputPoints_actionPerformed(ActionEvent e)
@@ -372,4 +390,10 @@ public class GPCAPanel extends JInternalFrame
   {
 
   }
+
+  protected void jvVersionSetting_actionPerfomed(ActionEvent arg0)
+  {
+    // TODO Auto-generated method stub
+
+  }
 }