import jalview.datamodel.SequenceI;
import jalview.gui.AlignmentPanel;
import jalview.gui.Desktop;
+import jalview.gui.JvSwingUtils;
import jalview.jbgui.PDBDocFieldPreferences.PreferenceSource;
import jalview.util.MessageManager;
+import jalview.ws.dbsources.PDBRestClient;
+import jalview.ws.dbsources.PDBRestClient.PDBDocField;
import java.awt.BorderLayout;
import java.awt.CardLayout;
import java.awt.Dimension;
import java.awt.FlowLayout;
+import java.awt.GridLayout;
import java.awt.event.ActionEvent;
import java.awt.event.ItemEvent;
import java.awt.event.ItemListener;
+import java.awt.event.KeyAdapter;
+import java.awt.event.KeyEvent;
+import java.awt.event.MouseAdapter;
+import java.awt.event.MouseEvent;
+import java.util.Arrays;
import javax.swing.ImageIcon;
import javax.swing.JButton;
public abstract class GStructureChooser extends JPanel implements
ItemListener
{
+ protected JPanel statusPanel = new JPanel();
+
+ public JLabel statusBar = new JLabel();
+
+ private JPanel pnl_actionsAndStatus = new JPanel(new BorderLayout());
+
protected String frameTitle = MessageManager
.getString("label.structure_chooser");
protected AlignmentPanel ap;
+ protected StringBuilder errorWarning = new StringBuilder();
+
protected JLabel lbl_result = new JLabel(
MessageManager.getString("label.select"));
private JPanel pnl_actions = new JPanel();
- private JPanel pnl_filter = new JPanel();
+ private JPanel pnl_main = new JPanel();
private JPanel pnl_idInput = new JPanel(new FlowLayout());
private JPanel pnl_fileChooserBL = new JPanel(new BorderLayout());
+ private JPanel pnl_locPDB = new JPanel(new BorderLayout());
+
protected JPanel pnl_switchableViews = new JPanel(new CardLayout());
protected CardLayout layout_switchableViews = (CardLayout) (pnl_switchableViews
protected ImageIcon errorImage = new ImageIcon(getClass().getResource(
"/images/error.png"));
+ protected ImageIcon warningImage = new ImageIcon(getClass().getResource(
+ "/images/warning.gif"));
+
+ protected JLabel lbl_warning = new JLabel(warningImage);
+
protected JLabel lbl_loading = new JLabel(loadingImage);
protected JLabel lbl_pdbManualFetchStatus = new JLabel(errorImage);
protected JLabel lbl_fromFileStatus = new JLabel(errorImage);
-
protected AssciateSeqPanel idInputAssSeqPanel = new AssciateSeqPanel();
protected AssciateSeqPanel fileChooserAssSeqPanel = new AssciateSeqPanel();
protected static final String VIEWS_ENTER_ID = "VIEWS_ENTER_ID";
- protected JTable tbl_summary = new JTable();
+ protected static final String VIEWS_LOCAL_PDB = "VIEWS_LOCAL_PDB";
- protected JScrollPane scrl_foundStructures = new JScrollPane(
- tbl_summary);
+ protected JTable tbl_summary = new JTable()
+ {
+ @Override
+ public String getToolTipText(MouseEvent evt)
+ {
+ String toolTipText = null;
+ java.awt.Point pnt = evt.getPoint();
+ int rowIndex = rowAtPoint(pnt);
+ int colIndex = columnAtPoint(pnt);
- private JTabbedPane tabbedPane = new JTabbedPane();
+ try
+ {
+ if (getValueAt(rowIndex, colIndex) == null)
+ {
+ return null;
+ }
+ toolTipText = getValueAt(rowIndex, colIndex).toString();
+ } catch (Exception e)
+ {
+ // e.printStackTrace();
+ }
+ toolTipText = (toolTipText == null ? null
+ : (toolTipText.length() > 500 ? JvSwingUtils.wrapTooltip(
+ true, "\"" + toolTipText.subSequence(0, 500)
+ + "...\"") : JvSwingUtils.wrapTooltip(true,
+ toolTipText)));
+ return toolTipText;
+ }
+ };
+
+ protected JScrollPane scrl_foundStructures = new JScrollPane(tbl_summary);
+
+ protected JTable tbl_local_pdb = new JTable();
+
+ protected JScrollPane scrl_localPDB = new JScrollPane(tbl_local_pdb);
+
+ private JTabbedPane pnl_filter = new JTabbedPane();
private PDBDocFieldPreferences pdbDocFieldPrefs = new PDBDocFieldPreferences(
PreferenceSource.STRUCTURE_CHOOSER);
+ protected PDBDocField[] previousWantedFields;
+
public GStructureChooser()
{
try
private void jbInit() throws Exception
{
tbl_summary.setAutoCreateRowSorter(true);
+ tbl_summary.getTableHeader().setReorderingAllowed(false);
+ tbl_summary.addMouseListener(new MouseAdapter()
+ {
+ @Override
+ public void mouseClicked(MouseEvent e)
+ {
+ validateSelections();
+ }
+
+ @Override
+ public void mouseReleased(MouseEvent e)
+ {
+ validateSelections();
+ }
+ });
+ tbl_summary.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ validateSelections();
+ switch (evt.getKeyCode())
+ {
+ case KeyEvent.VK_ESCAPE: // escape key
+ mainFrame.dispose();
+ break;
+ case KeyEvent.VK_ENTER: // enter key
+ if (btn_view.isEnabled())
+ {
+ ok_ActionPerformed();
+ }
+ break;
+ case KeyEvent.VK_TAB: // tab key
+ if (evt.isShiftDown())
+ {
+ pnl_filter.requestFocus();
+ }
+ else
+ {
+ btn_view.requestFocus();
+ }
+ evt.consume();
+ break;
+ default:
+ return;
+ }
+ }
+ });
+ tbl_local_pdb.setAutoCreateRowSorter(true);
+ tbl_local_pdb.getTableHeader().setReorderingAllowed(false);
+ tbl_local_pdb.addMouseListener(new MouseAdapter()
+ {
+ @Override
+ public void mouseClicked(MouseEvent e)
+ {
+ validateSelections();
+ }
+
+ @Override
+ public void mouseReleased(MouseEvent e)
+ {
+ validateSelections();
+ }
+ });
+ tbl_local_pdb.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ validateSelections();
+ switch (evt.getKeyCode())
+ {
+ case KeyEvent.VK_ESCAPE: // escape key
+ mainFrame.dispose();
+ break;
+ case KeyEvent.VK_ENTER: // enter key
+ if (btn_view.isEnabled())
+ {
+ ok_ActionPerformed();
+ }
+ break;
+ case KeyEvent.VK_TAB: // tab key
+ if (evt.isShiftDown())
+ {
+ cmb_filterOption.requestFocus();
+ }
+ else
+ {
+ if (btn_view.isEnabled())
+ {
+ btn_view.requestFocus();
+ }
+ else
+ {
+ btn_cancel.requestFocus();
+ }
+ }
+ evt.consume();
+ default:
+ return;
+ }
+ }
+ });
btn_view.setFont(new java.awt.Font("Verdana", 0, 12));
btn_view.setText(MessageManager.getString("action.view"));
btn_view.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
ok_ActionPerformed();
}
});
+ btn_view.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ ok_ActionPerformed();
+ }
+ }
+ });
+
btn_cancel.setFont(new java.awt.Font("Verdana", 0, 12));
btn_cancel.setText(MessageManager.getString("action.cancel"));
btn_cancel.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
mainFrame.dispose();
}
});
+ btn_cancel.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ mainFrame.dispose();
+ }
+ }
+ });
btn_pdbFromFile.setFont(new java.awt.Font("Verdana", 0, 12));
String btn_title = MessageManager.getString("label.select_pdb_file");
btn_pdbFromFile.setText(btn_title + " ");
btn_pdbFromFile.addActionListener(new java.awt.event.ActionListener()
{
+ @Override
public void actionPerformed(ActionEvent e)
{
pdbFromFile_actionPerformed();
}
});
+ btn_pdbFromFile.addKeyListener(new KeyAdapter()
+ {
+ @Override
+ public void keyPressed(KeyEvent evt)
+ {
+ if (evt.getKeyCode() == KeyEvent.VK_ENTER)
+ {
+ pdbFromFile_actionPerformed();
+ }
+ }
+ });
scrl_foundStructures.setPreferredSize(new Dimension(500, 300));
scrl_foundStructures
.setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
+ scrl_localPDB.setPreferredSize(new Dimension(500, 300));
+ scrl_localPDB
+ .setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
+
cmb_filterOption.setFont(new java.awt.Font("Verdana", 0, 12));
chk_invertFilter.setFont(new java.awt.Font("Verdana", 0, 12));
chk_rememberSettings.setFont(new java.awt.Font("Verdana", 0, 12));
-
+ chk_rememberSettings.setVisible(false);
txt_search.setToolTipText(MessageManager
.getString("label.enter_pdb_id"));
pnl_actions.add(btn_cancel);
// pnl_filter.add(lbl_result);
- pnl_filter.add(cmb_filterOption);
- pnl_filter.add(lbl_loading);
- pnl_filter.add(chk_invertFilter);
+ pnl_main.add(cmb_filterOption);
+ pnl_main.add(lbl_loading);
+ pnl_main.add(chk_invertFilter);
lbl_loading.setVisible(false);
- pnl_idInput.add(txt_search);
- pnl_idInput.add(lbl_pdbManualFetchStatus);
-
pnl_fileChooser.add(btn_pdbFromFile);
pnl_fileChooser.add(lbl_fromFileStatus);
-
pnl_fileChooserBL.add(fileChooserAssSeqPanel, BorderLayout.NORTH);
pnl_fileChooserBL.add(pnl_fileChooser, BorderLayout.CENTER);
+ pnl_idInput.add(txt_search);
+ pnl_idInput.add(lbl_pdbManualFetchStatus);
pnl_idInputBL.add(idInputAssSeqPanel, BorderLayout.NORTH);
pnl_idInputBL.add(pnl_idInput, BorderLayout.CENTER);
-
+
final String foundStructureSummary = MessageManager
.getString("label.found_structures_summary");
-
+ final String configureCols = MessageManager
+ .getString("label.configure_displayed_columns");
ChangeListener changeListener = new ChangeListener()
{
+ @Override
public void stateChanged(ChangeEvent changeEvent)
{
JTabbedPane sourceTabbedPane = (JTabbedPane) changeEvent
.getSource();
int index = sourceTabbedPane.getSelectedIndex();
+ btn_view.setVisible(true);
+ btn_cancel.setVisible(true);
+ if (sourceTabbedPane.getTitleAt(index).equals(configureCols))
+ {
+ btn_view.setEnabled(false);
+ btn_cancel.setEnabled(false);
+ btn_view.setVisible(false);
+ btn_cancel.setVisible(false);
+ previousWantedFields = PDBDocFieldPreferences
+ .getStructureSummaryFields().toArray(
+ new PDBRestClient.PDBDocField[0]);
+ }
if (sourceTabbedPane.getTitleAt(index)
.equals(foundStructureSummary))
{
- tabRefresh();
+ btn_cancel.setEnabled(true);
+ if (wantedFieldsUpdated())
+ {
+ tabRefresh();
+ }
+ else
+ {
+ validateSelections();
+ }
}
}
};
- tabbedPane.addChangeListener(changeListener);
- tabbedPane.setPreferredSize(new Dimension(500, 300));
- tabbedPane.add(foundStructureSummary, scrl_foundStructures);
- tabbedPane.add(
- MessageManager.getString("label.configure_displayed_columns"),
- pdbDocFieldPrefs);
-
+ pnl_filter.addChangeListener(changeListener);
+ pnl_filter.setPreferredSize(new Dimension(500, 300));
+ pnl_filter.add(foundStructureSummary, scrl_foundStructures);
+ pnl_filter.add(configureCols, pdbDocFieldPrefs);
+
+ pnl_locPDB.add(scrl_localPDB);
pnl_switchableViews.add(pnl_fileChooserBL, VIEWS_FROM_FILE);
pnl_switchableViews.add(pnl_idInputBL, VIEWS_ENTER_ID);
- pnl_switchableViews.add(tabbedPane, VIEWS_FILTER);
-
+ pnl_switchableViews.add(pnl_filter, VIEWS_FILTER);
+ pnl_switchableViews.add(pnl_locPDB, VIEWS_LOCAL_PDB);
+
this.setLayout(mainLayout);
- this.add(pnl_filter, java.awt.BorderLayout.NORTH);
+ this.add(pnl_main, java.awt.BorderLayout.NORTH);
this.add(pnl_switchableViews, java.awt.BorderLayout.CENTER);
- this.add(pnl_actions, java.awt.BorderLayout.SOUTH);
+ // this.add(pnl_actions, java.awt.BorderLayout.SOUTH);
+ statusPanel.setLayout(new GridLayout());
+ pnl_actionsAndStatus.add(pnl_actions, BorderLayout.CENTER);
+ pnl_actionsAndStatus.add(statusPanel, BorderLayout.SOUTH);
+ statusPanel.add(statusBar, null);
+ this.add(pnl_actionsAndStatus, java.awt.BorderLayout.SOUTH);
mainFrame.setVisible(true);
mainFrame.setContentPane(this);
Desktop.addInternalFrame(mainFrame, frameTitle, 800, 400);
}
-
+ public boolean wantedFieldsUpdated()
+ {
+ if (previousWantedFields == null)
+ {
+ return true;
+ }
+
+ return Arrays.equals(PDBDocFieldPreferences.getStructureSummaryFields()
+ .toArray(new PDBRestClient.PDBDocField[0]),
+ previousWantedFields) ? false : true;
+
+ }
+
@Override
/**
* Event listener for the 'filter' combo-box and 'invert' check-box
this.view = view;
}
+ @Override
public String toString()
{
return this.name;
public class AssociateSeqOptions
{
private SequenceI sequence;
+
private String name;
public AssociateSeqOptions(SequenceI seq)
this.sequence = seq;
}
+ @Override
public String toString()
{
return name;
public abstract void cmbAssSeqStateChanged();
public abstract void tabRefresh();
+
+ public abstract void validateSelections();
}
git://source.jalview.org / jalview.git / blobdiff