/*
- * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
- * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5)
+ * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
*
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
*
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
*/
package jalview.jbgui;
jmolHelp_actionPerformed(actionEvent);
}
});
+ alignStructs.setText("Align structures");
+ alignStructs.addActionListener(new ActionListener()
+ {
+ public void actionPerformed(ActionEvent actionEvent)
+ {
+ alignStructs_actionPerformed(actionEvent);
+ }
+ });
+ jmolActionMenu.setText("Jmol");
menuBar.add(fileMenu);
menuBar.add(viewMenu);
menuBar.add(colourMenu);
+ menuBar.add(jmolActionMenu);
+ jmolActionMenu.setVisible(false);
menuBar.add(helpMenu);
fileMenu.add(savemenu);
fileMenu.add(viewMapping);
savemenu.add(png);
savemenu.add(eps);
viewMenu.add(chainMenu);
+
colourMenu.add(seqColour);
colourMenu.add(chainColour);
colourMenu.add(chargeColour);
colourMenu.add(buriedColour);
colourMenu.add(userColour);
colourMenu.add(backGround);
+
+ colourButtons.add(seqColour);
+ colourButtons.add(chainColour);
+ colourButtons.add(chargeColour);
+ colourButtons.add(zappoColour);
+ colourButtons.add(taylorColour);
+ colourButtons.add(hydroColour);
+ colourButtons.add(helixColour);
+ colourButtons.add(strandColour);
+ colourButtons.add(turnColour);
+ colourButtons.add(buriedColour);
+ colourButtons.add(userColour);
+
helpMenu.add(jmolHelp);
+ jmolActionMenu.add(alignStructs);
+ }
+
+ protected void alignStructs_actionPerformed(ActionEvent actionEvent)
+ {
}
JMenuBar menuBar = new JMenuBar();
JMenu colourMenu = new JMenu();
+ protected JMenu jmolActionMenu = new JMenu();
+
+ JMenuItem alignStructs = new JMenuItem();
+
JMenuItem backGround = new JMenuItem();
- protected JCheckBoxMenuItem seqColour = new JCheckBoxMenuItem();
+ protected JRadioButtonMenuItem seqColour = new JRadioButtonMenuItem();
+
+ protected JRadioButtonMenuItem chainColour = new JRadioButtonMenuItem();
- JMenuItem chainColour = new JMenuItem();
+ protected JRadioButtonMenuItem chargeColour = new JRadioButtonMenuItem();
- JMenuItem chargeColour = new JMenuItem();
+ protected JRadioButtonMenuItem zappoColour = new JRadioButtonMenuItem();
- JMenuItem zappoColour = new JMenuItem();
+ protected JRadioButtonMenuItem taylorColour = new JRadioButtonMenuItem();
- JMenuItem taylorColour = new JMenuItem();
+ protected JRadioButtonMenuItem hydroColour = new JRadioButtonMenuItem();
- JMenuItem hydroColour = new JMenuItem();
+ protected JRadioButtonMenuItem strandColour = new JRadioButtonMenuItem();
- JMenuItem strandColour = new JMenuItem();
+ protected JRadioButtonMenuItem helixColour = new JRadioButtonMenuItem();
- JMenuItem helixColour = new JMenuItem();
+ protected JRadioButtonMenuItem turnColour = new JRadioButtonMenuItem();
- JMenuItem turnColour = new JMenuItem();
+ protected JRadioButtonMenuItem buriedColour = new JRadioButtonMenuItem();
- JMenuItem buriedColour = new JMenuItem();
+ protected JRadioButtonMenuItem userColour = new JRadioButtonMenuItem();
- JMenuItem userColour = new JMenuItem();
+ protected ButtonGroup colourButtons = new ButtonGroup();
JMenu helpMenu = new JMenu();