Merge branch 'develop' into features/r2_11_2/JAL-3829_3dbeacons

[jalview.git] / src / jalview / project / Jalview2XML.java

diff --git a/src/jalview/project/Jalview2XML.java b/src/jalview/project/Jalview2XML.java
index 64b3a9c..ffd942f 100644 (file)
--- a/src/jalview/project/Jalview2XML.java
+++ b/src/jalview/project/Jalview2XML.java
@@ -2529,6 +2529,7 @@ public class Jalview2XML
         dbref.setSource(ref.getSource());
         dbref.setVersion(ref.getVersion());
         dbref.setAccessionId(ref.getAccessionId());
+        dbref.setCanonical(ref.isCanonical());
         if (ref instanceof GeneLocus)
         {
           dbref.setLocus(true);
@@ -5622,6 +5623,7 @@ public class Jalview2XML
       {
         entry.setMap(addMapping(dr.getMapping()));
       }
+      entry.setCanonical(dr.isCanonical());
       datasetSequence.addDBRef(entry);
     }
   }