+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.renderer;
import jalview.datamodel.AlignmentAnnotation;
import jalview.renderer.api.AnnotationRendererFactoryI;
import jalview.renderer.api.AnnotationRowRendererI;
+import jalview.ws.datamodel.alphafold.PAEContactMatrix;
import java.util.IdentityHashMap;
-public class AnnotationRendererFactory implements
- AnnotationRendererFactoryI
+public class AnnotationRendererFactory implements AnnotationRendererFactoryI
{
private static AnnotationRendererFactoryI factory = null;
@Override
public AnnotationRowRendererI getRendererFor(AlignmentAnnotation row)
{
- if (row.graph == AlignmentAnnotation.CUSTOMRENDERER)
+ if (row.graph == AlignmentAnnotation.CONTACT_MAP)
{
- return new ContactMapRenderer();
+ // TODO consider configuring renderer/etc according to the type of matrix
+ // bound to the annotation row - needs to be looked up in that case
+ if (PAEContactMatrix.PAEMATRIX.equals(row.getCalcId()))
+ {
+ return ContactMapRenderer.newPAERenderer();
+ }
+ // TODO add potential for configuring renderer directly from the
+ // annotation row and/or viewmodel
+
}
return null;
}