JAL-1713 refactorings to allow save/restore Overview to/from project

[jalview.git] / src / jalview / renderer / OverviewRenderer.java

diff --git a/src/jalview/renderer/OverviewRenderer.java b/src/jalview/renderer/OverviewRenderer.java
index e9b4de4..b126465 100644 (file)
--- a/src/jalview/renderer/OverviewRenderer.java
+++ b/src/jalview/renderer/OverviewRenderer.java
@@ -225,7 +225,7 @@ public class OverviewRenderer
   int getColumnColourFromSequence(SequenceGroup[] allGroups,
           SequenceI seq, int lastcol)
   {
-    Color color = resColFinder.GAP_COLOUR;
+    Color color = resColFinder.gapColour;
 
     if ((seq != null) && (seq.getLength() > lastcol))
     {
@@ -288,8 +288,8 @@ public class OverviewRenderer
     Graphics2D g2d = (Graphics2D) hiddenImage.getGraphics();
 
     // set background to transparent
-    g2d.setComposite(AlphaComposite.Clear);
-    g2d.fillRect(0, 0, width, height);
+    // g2d.setComposite(AlphaComposite.Clear);
+    // g2d.fillRect(0, 0, width, height);
 
     // set next colour to opaque
     g2d.setComposite(AlphaComposite.Src);