-/*\r
- * This class was automatically generated with\r
- * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
- * Schema.\r
- * $Id$\r
- */\r
-\r
-package jalview.schemabinding.version2;\r
-\r
-//---------------------------------/\r
-//- Imported classes and packages -/\r
-//---------------------------------/\r
-\r
-import org.exolab.castor.xml.*;\r
-\r
-/**\r
- * Class AnnotationColours.\r
- *\r
- * @version $Revision$ $Date$\r
- */\r
-public class AnnotationColours\r
- implements java.io.Serializable\r
-{\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _aboveThreshold\r
- */\r
- private int _aboveThreshold;\r
-\r
- /**\r
- * keeps track of state for field: _aboveThreshold\r
- */\r
- private boolean _has_aboveThreshold;\r
-\r
- /**\r
- * Field _annotation\r
- */\r
- private java.lang.String _annotation;\r
-\r
- /**\r
- * Field _minColour\r
- */\r
- private int _minColour;\r
-\r
- /**\r
- * keeps track of state for field: _minColour\r
- */\r
- private boolean _has_minColour;\r
-\r
- /**\r
- * Field _maxColour\r
- */\r
- private int _maxColour;\r
-\r
- /**\r
- * keeps track of state for field: _maxColour\r
- */\r
- private boolean _has_maxColour;\r
-\r
- /**\r
- * Field _colourScheme\r
- */\r
- private java.lang.String _colourScheme;\r
-\r
- /**\r
- * Field _threshold\r
- */\r
- private float _threshold;\r
-\r
- /**\r
- * keeps track of state for field: _threshold\r
- */\r
- private boolean _has_threshold;\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public AnnotationColours()\r
- {\r
- super();\r
- } //-- jalview.schemabinding.version2.AnnotationColours()\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * Method deleteAboveThreshold\r
- *\r
- */\r
- public void deleteAboveThreshold()\r
- {\r
- this._has_aboveThreshold = false;\r
- } //-- void deleteAboveThreshold()\r
-\r
- /**\r
- * Method deleteMaxColour\r
- *\r
- */\r
- public void deleteMaxColour()\r
- {\r
- this._has_maxColour = false;\r
- } //-- void deleteMaxColour()\r
-\r
- /**\r
- * Method deleteMinColour\r
- *\r
- */\r
- public void deleteMinColour()\r
- {\r
- this._has_minColour = false;\r
- } //-- void deleteMinColour()\r
-\r
- /**\r
- * Method deleteThreshold\r
- *\r
- */\r
- public void deleteThreshold()\r
- {\r
- this._has_threshold = false;\r
- } //-- void deleteThreshold()\r
-\r
- /**\r
- * Returns the value of field 'aboveThreshold'.\r
- *\r
- * @return int\r
- * @return the value of field 'aboveThreshold'.\r
- */\r
- public int getAboveThreshold()\r
- {\r
- return this._aboveThreshold;\r
- } //-- int getAboveThreshold()\r
-\r
- /**\r
- * Returns the value of field 'annotation'.\r
- *\r
- * @return String\r
- * @return the value of field 'annotation'.\r
- */\r
- public java.lang.String getAnnotation()\r
- {\r
- return this._annotation;\r
- } //-- java.lang.String getAnnotation()\r
-\r
- /**\r
- * Returns the value of field 'colourScheme'.\r
- *\r
- * @return String\r
- * @return the value of field 'colourScheme'.\r
- */\r
- public java.lang.String getColourScheme()\r
- {\r
- return this._colourScheme;\r
- } //-- java.lang.String getColourScheme()\r
-\r
- /**\r
- * Returns the value of field 'maxColour'.\r
- *\r
- * @return int\r
- * @return the value of field 'maxColour'.\r
- */\r
- public int getMaxColour()\r
- {\r
- return this._maxColour;\r
- } //-- int getMaxColour()\r
-\r
- /**\r
- * Returns the value of field 'minColour'.\r
- *\r
- * @return int\r
- * @return the value of field 'minColour'.\r
- */\r
- public int getMinColour()\r
- {\r
- return this._minColour;\r
- } //-- int getMinColour()\r
-\r
- /**\r
- * Returns the value of field 'threshold'.\r
- *\r
- * @return float\r
- * @return the value of field 'threshold'.\r
- */\r
- public float getThreshold()\r
- {\r
- return this._threshold;\r
- } //-- float getThreshold()\r
-\r
- /**\r
- * Method hasAboveThreshold\r
- *\r
- *\r
- *\r
- * @return boolean\r
- */\r
- public boolean hasAboveThreshold()\r
- {\r
- return this._has_aboveThreshold;\r
- } //-- boolean hasAboveThreshold()\r
-\r
- /**\r
- * Method hasMaxColour\r
- *\r
- *\r
- *\r
- * @return boolean\r
- */\r
- public boolean hasMaxColour()\r
- {\r
- return this._has_maxColour;\r
- } //-- boolean hasMaxColour()\r
-\r
- /**\r
- * Method hasMinColour\r
- *\r
- *\r
- *\r
- * @return boolean\r
- */\r
- public boolean hasMinColour()\r
- {\r
- return this._has_minColour;\r
- } //-- boolean hasMinColour()\r
-\r
- /**\r
- * Method hasThreshold\r
- *\r
- *\r
- *\r
- * @return boolean\r
- */\r
- public boolean hasThreshold()\r
- {\r
- return this._has_threshold;\r
- } //-- boolean hasThreshold()\r
-\r
- /**\r
- * Method isValid\r
- *\r
- *\r
- *\r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try\r
- {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex)\r
- {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid()\r
-\r
- /**\r
- * Method marshal\r
- *\r
- *\r
- *\r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
-\r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer)\r
-\r
- /**\r
- * Method marshal\r
- *\r
- *\r
- *\r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
-\r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler)\r
-\r
- /**\r
- * Sets the value of field 'aboveThreshold'.\r
- *\r
- * @param aboveThreshold the value of field 'aboveThreshold'.\r
- */\r
- public void setAboveThreshold(int aboveThreshold)\r
- {\r
- this._aboveThreshold = aboveThreshold;\r
- this._has_aboveThreshold = true;\r
- } //-- void setAboveThreshold(int)\r
-\r
- /**\r
- * Sets the value of field 'annotation'.\r
- *\r
- * @param annotation the value of field 'annotation'.\r
- */\r
- public void setAnnotation(java.lang.String annotation)\r
- {\r
- this._annotation = annotation;\r
- } //-- void setAnnotation(java.lang.String)\r
-\r
- /**\r
- * Sets the value of field 'colourScheme'.\r
- *\r
- * @param colourScheme the value of field 'colourScheme'.\r
- */\r
- public void setColourScheme(java.lang.String colourScheme)\r
- {\r
- this._colourScheme = colourScheme;\r
- } //-- void setColourScheme(java.lang.String)\r
-\r
- /**\r
- * Sets the value of field 'maxColour'.\r
- *\r
- * @param maxColour the value of field 'maxColour'.\r
- */\r
- public void setMaxColour(int maxColour)\r
- {\r
- this._maxColour = maxColour;\r
- this._has_maxColour = true;\r
- } //-- void setMaxColour(int)\r
-\r
- /**\r
- * Sets the value of field 'minColour'.\r
- *\r
- * @param minColour the value of field 'minColour'.\r
- */\r
- public void setMinColour(int minColour)\r
- {\r
- this._minColour = minColour;\r
- this._has_minColour = true;\r
- } //-- void setMinColour(int)\r
-\r
- /**\r
- * Sets the value of field 'threshold'.\r
- *\r
- * @param threshold the value of field 'threshold'.\r
- */\r
- public void setThreshold(float threshold)\r
- {\r
- this._threshold = threshold;\r
- this._has_threshold = true;\r
- } //-- void setThreshold(float)\r
-\r
- /**\r
- * Method unmarshal\r
- *\r
- *\r
- *\r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- return (jalview.schemabinding.version2.AnnotationColours) Unmarshaller.\r
- unmarshal(jalview.schemabinding.version2.AnnotationColours.class,\r
- reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader)\r
-\r
- /**\r
- * Method validate\r
- *\r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
- {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.\r
- Validator();\r
- validator.validate(this);\r
- } //-- void validate()\r
-\r
-}\r
+/*
+ * This class was automatically generated with
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
+ * Schema.
+ * $Id$
+ */
+
+package jalview.schemabinding.version2;
+
+//---------------------------------/
+//- Imported classes and packages -/
+//---------------------------------/
+
+import org.exolab.castor.xml.Marshaller;
+import org.exolab.castor.xml.Unmarshaller;
+
+/**
+ * Class AnnotationColours.
+ *
+ * @version $Revision$ $Date$
+ */
+public class AnnotationColours implements java.io.Serializable
+{
+
+ // --------------------------/
+ // - Class/Member Variables -/
+ // --------------------------/
+
+ /**
+ * Field _aboveThreshold.
+ */
+ private int _aboveThreshold;
+
+ /**
+ * keeps track of state for field: _aboveThreshold
+ */
+ private boolean _has_aboveThreshold;
+
+ /**
+ * Field _annotation.
+ */
+ private java.lang.String _annotation;
+
+ /**
+ * Field _minColour.
+ */
+ private int _minColour;
+
+ /**
+ * keeps track of state for field: _minColour
+ */
+ private boolean _has_minColour;
+
+ /**
+ * Field _maxColour.
+ */
+ private int _maxColour;
+
+ /**
+ * keeps track of state for field: _maxColour
+ */
+ private boolean _has_maxColour;
+
+ /**
+ * Field _colourScheme.
+ */
+ private java.lang.String _colourScheme;
+
+ /**
+ * Field _threshold.
+ */
+ private float _threshold;
+
+ /**
+ * keeps track of state for field: _threshold
+ */
+ private boolean _has_threshold;
+
+ // ----------------/
+ // - Constructors -/
+ // ----------------/
+
+ public AnnotationColours()
+ {
+ super();
+ }
+
+ // -----------/
+ // - Methods -/
+ // -----------/
+
+ /**
+ */
+ public void deleteAboveThreshold()
+ {
+ this._has_aboveThreshold = false;
+ }
+
+ /**
+ */
+ public void deleteMaxColour()
+ {
+ this._has_maxColour = false;
+ }
+
+ /**
+ */
+ public void deleteMinColour()
+ {
+ this._has_minColour = false;
+ }
+
+ /**
+ */
+ public void deleteThreshold()
+ {
+ this._has_threshold = false;
+ }
+
+ /**
+ * Returns the value of field 'aboveThreshold'.
+ *
+ * @return the value of field 'AboveThreshold'.
+ */
+ public int getAboveThreshold()
+ {
+ return this._aboveThreshold;
+ }
+
+ /**
+ * Returns the value of field 'annotation'.
+ *
+ * @return the value of field 'Annotation'.
+ */
+ public java.lang.String getAnnotation()
+ {
+ return this._annotation;
+ }
+
+ /**
+ * Returns the value of field 'colourScheme'.
+ *
+ * @return the value of field 'ColourScheme'.
+ */
+ public java.lang.String getColourScheme()
+ {
+ return this._colourScheme;
+ }
+
+ /**
+ * Returns the value of field 'maxColour'.
+ *
+ * @return the value of field 'MaxColour'.
+ */
+ public int getMaxColour()
+ {
+ return this._maxColour;
+ }
+
+ /**
+ * Returns the value of field 'minColour'.
+ *
+ * @return the value of field 'MinColour'.
+ */
+ public int getMinColour()
+ {
+ return this._minColour;
+ }
+
+ /**
+ * Returns the value of field 'threshold'.
+ *
+ * @return the value of field 'Threshold'.
+ */
+ public float getThreshold()
+ {
+ return this._threshold;
+ }
+
+ /**
+ * Method hasAboveThreshold.
+ *
+ * @return true if at least one AboveThreshold has been added
+ */
+ public boolean hasAboveThreshold()
+ {
+ return this._has_aboveThreshold;
+ }
+
+ /**
+ * Method hasMaxColour.
+ *
+ * @return true if at least one MaxColour has been added
+ */
+ public boolean hasMaxColour()
+ {
+ return this._has_maxColour;
+ }
+
+ /**
+ * Method hasMinColour.
+ *
+ * @return true if at least one MinColour has been added
+ */
+ public boolean hasMinColour()
+ {
+ return this._has_minColour;
+ }
+
+ /**
+ * Method hasThreshold.
+ *
+ * @return true if at least one Threshold has been added
+ */
+ public boolean hasThreshold()
+ {
+ return this._has_threshold;
+ }
+
+ /**
+ * Method isValid.
+ *
+ * @return true if this object is valid according to the schema
+ */
+ public boolean isValid()
+ {
+ try
+ {
+ validate();
+ } catch (org.exolab.castor.xml.ValidationException vex)
+ {
+ return false;
+ }
+ return true;
+ }
+
+ /**
+ *
+ *
+ * @param out
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ */
+ public void marshal(final java.io.Writer out)
+ throws org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ Marshaller.marshal(this, out);
+ }
+
+ /**
+ *
+ *
+ * @param handler
+ * @throws java.io.IOException
+ * if an IOException occurs during marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ */
+ public void marshal(final org.xml.sax.ContentHandler handler)
+ throws java.io.IOException,
+ org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ Marshaller.marshal(this, handler);
+ }
+
+ /**
+ * Sets the value of field 'aboveThreshold'.
+ *
+ * @param aboveThreshold
+ * the value of field 'aboveThreshold'.
+ */
+ public void setAboveThreshold(final int aboveThreshold)
+ {
+ this._aboveThreshold = aboveThreshold;
+ this._has_aboveThreshold = true;
+ }
+
+ /**
+ * Sets the value of field 'annotation'.
+ *
+ * @param annotation
+ * the value of field 'annotation'.
+ */
+ public void setAnnotation(final java.lang.String annotation)
+ {
+ this._annotation = annotation;
+ }
+
+ /**
+ * Sets the value of field 'colourScheme'.
+ *
+ * @param colourScheme
+ * the value of field 'colourScheme'.
+ */
+ public void setColourScheme(final java.lang.String colourScheme)
+ {
+ this._colourScheme = colourScheme;
+ }
+
+ /**
+ * Sets the value of field 'maxColour'.
+ *
+ * @param maxColour
+ * the value of field 'maxColour'.
+ */
+ public void setMaxColour(final int maxColour)
+ {
+ this._maxColour = maxColour;
+ this._has_maxColour = true;
+ }
+
+ /**
+ * Sets the value of field 'minColour'.
+ *
+ * @param minColour
+ * the value of field 'minColour'.
+ */
+ public void setMinColour(final int minColour)
+ {
+ this._minColour = minColour;
+ this._has_minColour = true;
+ }
+
+ /**
+ * Sets the value of field 'threshold'.
+ *
+ * @param threshold
+ * the value of field 'threshold'.
+ */
+ public void setThreshold(final float threshold)
+ {
+ this._threshold = threshold;
+ this._has_threshold = true;
+ }
+
+ /**
+ * Method unmarshal.
+ *
+ * @param reader
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ * @return the unmarshaled jalview.schemabinding.version2.AnnotationColours
+ */
+ public static jalview.schemabinding.version2.AnnotationColours unmarshal(
+ final java.io.Reader reader)
+ throws org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ return (jalview.schemabinding.version2.AnnotationColours) Unmarshaller
+ .unmarshal(
+ jalview.schemabinding.version2.AnnotationColours.class,
+ reader);
+ }
+
+ /**
+ *
+ *
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ */
+ public void validate() throws org.exolab.castor.xml.ValidationException
+ {
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
+ validator.validate(this);
+ }
+
+}
git://source.jalview.org / jalview.git / blobdiff