private boolean _has_showSequenceLogo;
/**
- * Optional sequence group ID (only needs to be unique for this
- * alignment)
+ * Field _normaliseSequenceLogo.
+ */
+ private boolean _normaliseSequenceLogo = false;
+
+ /**
+ * keeps track of state for field: _normaliseSequenceLogo
+ */
+ private boolean _has_normaliseSequenceLogo;
+
+ /**
+ * Optional sequence group ID (only
+ * needs to be
+ * unique for this
+ * alignment)
*
*/
private java.lang.String _id;
*/
private java.util.Vector _seqList;
+ /**
+ * Field _annotationColours.
+ */
+ private jalview.schemabinding.version2.AnnotationColours _annotationColours;
+
//----------------/
//- Constructors -/
/**
*/
+ public void deleteNormaliseSequenceLogo(
+ ) {
+ this._has_normaliseSequenceLogo= false;
+ }
+
+ /**
+ */
public void deleteOutlineColour(
) {
this._has_outlineColour= false;
}
/**
+ * Returns the value of field 'annotationColours'.
+ *
+ * @return the value of field 'AnnotationColours'.
+ */
+ public jalview.schemabinding.version2.AnnotationColours getAnnotationColours(
+ ) {
+ return this._annotationColours;
+ }
+
+ /**
* Returns the value of field 'colour'.
*
* @return the value of field 'Colour'.
/**
* Returns the value of field 'id'. The field 'id' has the
* following description: Optional sequence group ID (only
- * needs to be unique for this alignment)
+ * needs to be
+ * unique for this
+ * alignment)
*
*
* @return the value of field 'Id'.
}
/**
+ * Returns the value of field 'normaliseSequenceLogo'.
+ *
+ * @return the value of field 'NormaliseSequenceLogo'.
+ */
+ public boolean getNormaliseSequenceLogo(
+ ) {
+ return this._normaliseSequenceLogo;
+ }
+
+ /**
* Returns the value of field 'outlineColour'.
*
* @return the value of field 'OutlineColour'.
}
/**
+ * Method hasNormaliseSequenceLogo.
+ *
+ * @return true if at least one NormaliseSequenceLogo has been
+ * added
+ */
+ public boolean hasNormaliseSequenceLogo(
+ ) {
+ return this._has_normaliseSequenceLogo;
+ }
+
+ /**
* Method hasOutlineColour.
*
* @return true if at least one OutlineColour has been added
}
/**
+ * Returns the value of field 'normaliseSequenceLogo'.
+ *
+ * @return the value of field 'NormaliseSequenceLogo'.
+ */
+ public boolean isNormaliseSequenceLogo(
+ ) {
+ return this._normaliseSequenceLogo;
+ }
+
+ /**
* Returns the value of field 'showConsensusHistogram'.
*
* @return the value of field 'ShowConsensusHistogram'.
}
/**
+ * Sets the value of field 'annotationColours'.
+ *
+ * @param annotationColours the value of field
+ * 'annotationColours'.
+ */
+ public void setAnnotationColours(
+ final jalview.schemabinding.version2.AnnotationColours annotationColours) {
+ this._annotationColours = annotationColours;
+ }
+
+ /**
* Sets the value of field 'colour'.
*
* @param colour the value of field 'colour'.
/**
* Sets the value of field 'id'. The field 'id' has the
* following description: Optional sequence group ID (only
- * needs to be unique for this alignment)
+ * needs to be
+ * unique for this
+ * alignment)
*
*
* @param id the value of field 'id'.
}
/**
+ * Sets the value of field 'normaliseSequenceLogo'.
+ *
+ * @param normaliseSequenceLogo the value of field
+ * 'normaliseSequenceLogo'.
+ */
+ public void setNormaliseSequenceLogo(
+ final boolean normaliseSequenceLogo) {
+ this._normaliseSequenceLogo = normaliseSequenceLogo;
+ this._has_normaliseSequenceLogo = true;
+ }
+
+ /**
* Sets the value of field 'outlineColour'.
*
* @param outlineColour the value of field 'outlineColour'.