/*\r
* This class was automatically generated with \r
- * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML\r
* Schema.\r
* $Id$\r
*/\r
//- Imported classes and packages -/\r
//---------------------------------/\r
\r
-import java.io.IOException;\r
-import java.io.Reader;\r
-import java.io.Serializable;\r
-import java.io.Writer;\r
-import java.util.Enumeration;\r
-import java.util.Vector;\r
-import org.exolab.castor.xml.MarshalException;\r
import org.exolab.castor.xml.Marshaller;\r
import org.exolab.castor.xml.Unmarshaller;\r
-import org.exolab.castor.xml.ValidationException;\r
-import org.xml.sax.ContentHandler;\r
\r
/**\r
* Class Pdbentry.\r
//--------------------------/\r
\r
/**\r
- * Field _id\r
+ * Field _id.\r
*/\r
private java.lang.String _id;\r
\r
/**\r
- * Field _type\r
+ * Field _type.\r
*/\r
private java.lang.String _type;\r
\r
/**\r
- * Field _file\r
+ * Field _file.\r
*/\r
private java.lang.String _file;\r
\r
/**\r
- * Field _items\r
+ * Field _items.\r
*/\r
private java.util.Vector _items;\r
\r
\r
public Pdbentry() {\r
super();\r
- _items = new Vector();\r
- } //-- jalview.schemabinding.version2.Pdbentry()\r
+ this._items = new java.util.Vector();\r
+ }\r
\r
\r
//-----------/\r
//-----------/\r
\r
/**\r
- * Method addPdbentryItem\r
- * \r
* \r
* \r
* @param vPdbentryItem\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
*/\r
- public void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _items.addElement(vPdbentryItem);\r
- } //-- void addPdbentryItem(jalview.schemabinding.version2.PdbentryItem) \r
+ public void addPdbentryItem(\r
+ final jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._items.addElement(vPdbentryItem);\r
+ }\r
\r
/**\r
- * Method addPdbentryItem\r
- * \r
* \r
* \r
* @param index\r
* @param vPdbentryItem\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
*/\r
- public void addPdbentryItem(int index, jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _items.insertElementAt(vPdbentryItem, index);\r
- } //-- void addPdbentryItem(int, jalview.schemabinding.version2.PdbentryItem) \r
+ public void addPdbentryItem(\r
+ final int index,\r
+ final jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._items.add(index, vPdbentryItem);\r
+ }\r
\r
/**\r
- * Method enumeratePdbentryItem\r
- * \r
- * \r
+ * Method enumeratePdbentryItem.\r
* \r
- * @return Enumeration\r
+ * @return an Enumeration over all\r
+ * jalview.schemabinding.version2.PdbentryItem elements\r
*/\r
- public java.util.Enumeration enumeratePdbentryItem()\r
- {\r
- return _items.elements();\r
- } //-- java.util.Enumeration enumeratePdbentryItem() \r
+ public java.util.Enumeration enumeratePdbentryItem(\r
+ ) {\r
+ return this._items.elements();\r
+ }\r
\r
/**\r
* Returns the value of field 'file'.\r
* \r
- * @return String\r
- * @return the value of field 'file'.\r
+ * @return the value of field 'File'.\r
*/\r
- public java.lang.String getFile()\r
- {\r
+ public java.lang.String getFile(\r
+ ) {\r
return this._file;\r
- } //-- java.lang.String getFile() \r
+ }\r
\r
/**\r
* Returns the value of field 'id'.\r
* \r
- * @return String\r
- * @return the value of field 'id'.\r
+ * @return the value of field 'Id'.\r
*/\r
- public java.lang.String getId()\r
- {\r
+ public java.lang.String getId(\r
+ ) {\r
return this._id;\r
- } //-- java.lang.String getId() \r
+ }\r
\r
/**\r
- * Method getPdbentryItem\r
- * \r
- * \r
+ * Method getPdbentryItem.\r
* \r
* @param index\r
- * @return PdbentryItem\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ * @return the value of the\r
+ * jalview.schemabinding.version2.PdbentryItem at the given inde\r
*/\r
- public jalview.schemabinding.version2.PdbentryItem getPdbentryItem(int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _items.size())) {\r
- throw new IndexOutOfBoundsException();\r
+ public jalview.schemabinding.version2.PdbentryItem getPdbentryItem(\r
+ final int index)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._items.size()) {\r
+ throw new IndexOutOfBoundsException("getPdbentryItem: Index value '" + index + "' not in range [0.." + (this._items.size() - 1) + "]");\r
}\r
\r
- return (jalview.schemabinding.version2.PdbentryItem) _items.elementAt(index);\r
- } //-- jalview.schemabinding.version2.PdbentryItem getPdbentryItem(int) \r
+ return (jalview.schemabinding.version2.PdbentryItem) _items.get(index);\r
+ }\r
\r
/**\r
- * Method getPdbentryItem\r
- * \r
- * \r
- * \r
- * @return PdbentryItem\r
+ * Method getPdbentryItem.Returns the contents of the\r
+ * collection in an Array. <p>Note: Just in case the\r
+ * collection contents are changing in another thread, we pass\r
+ * a 0-length Array of the correct type into the API call. \r
+ * This way we <i>know</i> that the Array returned is of\r
+ * exactly the correct length.\r
+ * \r
+ * @return this collection as an Array\r
*/\r
- public jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem()\r
- {\r
- int size = _items.size();\r
- jalview.schemabinding.version2.PdbentryItem[] mArray = new jalview.schemabinding.version2.PdbentryItem[size];\r
- for (int index = 0; index < size; index++) {\r
- mArray[index] = (jalview.schemabinding.version2.PdbentryItem) _items.elementAt(index);\r
- }\r
- return mArray;\r
- } //-- jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem() \r
+ public jalview.schemabinding.version2.PdbentryItem[] getPdbentryItem(\r
+ ) {\r
+ jalview.schemabinding.version2.PdbentryItem[] array = new jalview.schemabinding.version2.PdbentryItem[0];\r
+ return (jalview.schemabinding.version2.PdbentryItem[]) this._items.toArray(array);\r
+ }\r
\r
/**\r
- * Method getPdbentryItemCount\r
- * \r
- * \r
+ * Method getPdbentryItemCount.\r
* \r
- * @return int\r
+ * @return the size of this collection\r
*/\r
- public int getPdbentryItemCount()\r
- {\r
- return _items.size();\r
- } //-- int getPdbentryItemCount() \r
+ public int getPdbentryItemCount(\r
+ ) {\r
+ return this._items.size();\r
+ }\r
\r
/**\r
* Returns the value of field 'type'.\r
* \r
- * @return String\r
- * @return the value of field 'type'.\r
+ * @return the value of field 'Type'.\r
*/\r
- public java.lang.String getType()\r
- {\r
+ public java.lang.String getType(\r
+ ) {\r
return this._type;\r
- } //-- java.lang.String getType() \r
+ }\r
\r
/**\r
- * Method isValid\r
+ * Method isValid.\r
* \r
- * \r
- * \r
- * @return boolean\r
+ * @return true if this object is valid according to the schema\r
*/\r
- public boolean isValid()\r
- {\r
+ public boolean isValid(\r
+ ) {\r
try {\r
validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
+ } catch (org.exolab.castor.xml.ValidationException vex) {\r
return false;\r
}\r
return true;\r
- } //-- boolean isValid() \r
+ }\r
\r
/**\r
- * Method marshal\r
- * \r
* \r
* \r
* @param out\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
*/\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
+ public void marshal(\r
+ final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
+ }\r
\r
/**\r
- * Method marshal\r
- * \r
* \r
* \r
* @param handler\r
+ * @throws java.io.IOException if an IOException occurs during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
*/\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
+ public void marshal(\r
+ final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
+ }\r
\r
/**\r
- * Method removeAllPdbentryItem\r
- * \r
*/\r
- public void removeAllPdbentryItem()\r
- {\r
- _items.removeAllElements();\r
- } //-- void removeAllPdbentryItem() \r
+ public void removeAllPdbentryItem(\r
+ ) {\r
+ this._items.clear();\r
+ }\r
\r
/**\r
- * Method removePdbentryItem\r
- * \r
+ * Method removePdbentryItem.\r
* \r
+ * @param vPdbentryItem\r
+ * @return true if the object was removed from the collection.\r
+ */\r
+ public boolean removePdbentryItem(\r
+ final jalview.schemabinding.version2.PdbentryItem vPdbentryItem) {\r
+ boolean removed = _items.remove(vPdbentryItem);\r
+ return removed;\r
+ }\r
+\r
+ /**\r
+ * Method removePdbentryItemAt.\r
* \r
* @param index\r
- * @return PdbentryItem\r
+ * @return the element removed from the collection\r
*/\r
- public jalview.schemabinding.version2.PdbentryItem removePdbentryItem(int index)\r
- {\r
- java.lang.Object obj = _items.elementAt(index);\r
- _items.removeElementAt(index);\r
+ public jalview.schemabinding.version2.PdbentryItem removePdbentryItemAt(\r
+ final int index) {\r
+ java.lang.Object obj = this._items.remove(index);\r
return (jalview.schemabinding.version2.PdbentryItem) obj;\r
- } //-- jalview.schemabinding.version2.PdbentryItem removePdbentryItem(int) \r
+ }\r
\r
/**\r
* Sets the value of field 'file'.\r
* \r
* @param file the value of field 'file'.\r
*/\r
- public void setFile(java.lang.String file)\r
- {\r
+ public void setFile(\r
+ final java.lang.String file) {\r
this._file = file;\r
- } //-- void setFile(java.lang.String) \r
+ }\r
\r
/**\r
* Sets the value of field 'id'.\r
* \r
* @param id the value of field 'id'.\r
*/\r
- public void setId(java.lang.String id)\r
- {\r
+ public void setId(\r
+ final java.lang.String id) {\r
this._id = id;\r
- } //-- void setId(java.lang.String) \r
+ }\r
\r
/**\r
- * Method setPdbentryItem\r
- * \r
* \r
* \r
* @param index\r
* @param vPdbentryItem\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
*/\r
- public void setPdbentryItem(int index, jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _items.size())) {\r
- throw new IndexOutOfBoundsException();\r
+ public void setPdbentryItem(\r
+ final int index,\r
+ final jalview.schemabinding.version2.PdbentryItem vPdbentryItem)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._items.size()) {\r
+ throw new IndexOutOfBoundsException("setPdbentryItem: Index value '" + index + "' not in range [0.." + (this._items.size() - 1) + "]");\r
}\r
- _items.setElementAt(vPdbentryItem, index);\r
- } //-- void setPdbentryItem(int, jalview.schemabinding.version2.PdbentryItem) \r
+ \r
+ this._items.set(index, vPdbentryItem);\r
+ }\r
\r
/**\r
- * Method setPdbentryItem\r
- * \r
* \r
* \r
- * @param pdbentryItemArray\r
+ * @param vPdbentryItemArray\r
*/\r
- public void setPdbentryItem(jalview.schemabinding.version2.PdbentryItem[] pdbentryItemArray)\r
- {\r
+ public void setPdbentryItem(\r
+ final jalview.schemabinding.version2.PdbentryItem[] vPdbentryItemArray) {\r
//-- copy array\r
- _items.removeAllElements();\r
- for (int i = 0; i < pdbentryItemArray.length; i++) {\r
- _items.addElement(pdbentryItemArray[i]);\r
+ _items.clear();\r
+ \r
+ for (int i = 0; i < vPdbentryItemArray.length; i++) {\r
+ this._items.add(vPdbentryItemArray[i]);\r
}\r
- } //-- void setPdbentryItem(jalview.schemabinding.version2.PdbentryItem) \r
+ }\r
\r
/**\r
* Sets the value of field 'type'.\r
* \r
* @param type the value of field 'type'.\r
*/\r
- public void setType(java.lang.String type)\r
- {\r
+ public void setType(\r
+ final java.lang.String type) {\r
this._type = type;\r
- } //-- void setType(java.lang.String) \r
+ }\r
\r
/**\r
- * Method unmarshal\r
- * \r
- * \r
+ * Method unmarshal.\r
* \r
* @param reader\r
- * @return Object\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @return the unmarshaled\r
+ * jalview.schemabinding.version2.Pdbentry\r
*/\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
+ public static jalview.schemabinding.version2.Pdbentry unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
return (jalview.schemabinding.version2.Pdbentry) Unmarshaller.unmarshal(jalview.schemabinding.version2.Pdbentry.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
+ }\r
\r
/**\r
- * Method validate\r
* \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
*/\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
- {\r
+ public void validate(\r
+ )\r
+ throws org.exolab.castor.xml.ValidationException {\r
org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
validator.validate(this);\r
- } //-- void validate() \r
+ }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff