/*\r
- * This class was automatically generated with \r
+ * This class was automatically generated with\r
* <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
* Schema.\r
* $Id$\r
\r
package jalview.schemabinding.version2;\r
\r
- //---------------------------------/\r
- //- Imported classes and packages -/\r
//---------------------------------/\r
+//- Imported classes and packages -/\r
+//---------------------------------/\r
+\r
+import java.util.*;\r
\r
-import java.io.IOException;\r
-import java.io.Reader;\r
-import java.io.Serializable;\r
-import java.io.Writer;\r
-import org.exolab.castor.xml.MarshalException;\r
-import org.exolab.castor.xml.Marshaller;\r
-import org.exolab.castor.xml.Unmarshaller;\r
-import org.exolab.castor.xml.ValidationException;\r
-import org.xml.sax.ContentHandler;\r
+import org.exolab.castor.xml.*;\r
\r
/**\r
* Class Sequence.\r
- * \r
+ *\r
* @version $Revision$ $Date$\r
*/\r
-public class Sequence extends SequenceType \r
-implements java.io.Serializable\r
+public class Sequence\r
+ extends jalview.schemabinding.version2.SequenceType implements java.io.\r
+ Serializable\r
{\r
\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _DBRefList\r
+ */\r
+ private java.util.Vector _DBRefList;\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public Sequence()\r
+ {\r
+ super();\r
+ _DBRefList = new Vector();\r
+ } //-- jalview.schemabinding.version2.Sequence()\r
\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
\r
- public Sequence() {\r
- super();\r
- } //-- jalview.schemabinding.version2.Sequence()\r
+ /**\r
+ * Method addDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param vDBRef\r
+ */\r
+ public void addDBRef(jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _DBRefList.addElement(vDBRef);\r
+ } //-- void addDBRef(jalview.schemabinding.version2.DBRef)\r
\r
+ /**\r
+ * Method addDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @param vDBRef\r
+ */\r
+ public void addDBRef(int index, jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _DBRefList.insertElementAt(vDBRef, index);\r
+ } //-- void addDBRef(int, jalview.schemabinding.version2.DBRef)\r
\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
+ /**\r
+ * Method enumerateDBRef\r
+ *\r
+ *\r
+ *\r
+ * @return Enumeration\r
+ */\r
+ public java.util.Enumeration enumerateDBRef()\r
+ {\r
+ return _DBRefList.elements();\r
+ } //-- java.util.Enumeration enumerateDBRef()\r
\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
+ /**\r
+ * Method getDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef getDBRef(int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ //-- check bounds for index\r
+ if ( (index < 0) || (index > _DBRefList.size()))\r
{\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+ throw new IndexOutOfBoundsException();\r
+ }\r
+\r
+ return (jalview.schemabinding.version2.DBRef) _DBRefList.elementAt(index);\r
+ } //-- jalview.schemabinding.version2.DBRef getDBRef(int)\r
+\r
+ /**\r
+ * Method getDBRef\r
+ *\r
+ *\r
+ *\r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef[] getDBRef()\r
+ {\r
+ int size = _DBRefList.size();\r
+ jalview.schemabinding.version2.DBRef[] mArray = new jalview.schemabinding.\r
+ version2.DBRef[size];\r
+ for (int index = 0; index < size; index++)\r
+ {\r
+ mArray[index] = (jalview.schemabinding.version2.DBRef) _DBRefList.\r
+ elementAt(index);\r
+ }\r
+ return mArray;\r
+ } //-- jalview.schemabinding.version2.DBRef[] getDBRef()\r
+\r
+ /**\r
+ * Method getDBRefCount\r
+ *\r
+ *\r
+ *\r
+ * @return int\r
+ */\r
+ public int getDBRefCount()\r
+ {\r
+ return _DBRefList.size();\r
+ } //-- int getDBRefCount()\r
+\r
+ /**\r
+ * Method isValid\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean isValid()\r
+ {\r
+ try\r
{\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+ validate();\r
+ }\r
+ catch (org.exolab.castor.xml.ValidationException vex)\r
{\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Method unmarshal\r
- * \r
- * \r
- * \r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+ return false;\r
+ }\r
+ return true;\r
+ } //-- boolean isValid()\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param out\r
+ */\r
+ public void marshal(java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, out);\r
+ } //-- void marshal(java.io.Writer)\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param handler\r
+ */\r
+ public void marshal(org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, handler);\r
+ } //-- void marshal(org.xml.sax.ContentHandler)\r
+\r
+ /**\r
+ * Method removeAllDBRef\r
+ *\r
+ */\r
+ public void removeAllDBRef()\r
+ {\r
+ _DBRefList.removeAllElements();\r
+ } //-- void removeAllDBRef()\r
+\r
+ /**\r
+ * Method removeDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef removeDBRef(int index)\r
+ {\r
+ java.lang.Object obj = _DBRefList.elementAt(index);\r
+ _DBRefList.removeElementAt(index);\r
+ return (jalview.schemabinding.version2.DBRef) obj;\r
+ } //-- jalview.schemabinding.version2.DBRef removeDBRef(int)\r
+\r
+ /**\r
+ * Method setDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param index\r
+ * @param vDBRef\r
+ */\r
+ public void setDBRef(int index, jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ //-- check bounds for index\r
+ if ( (index < 0) || (index > _DBRefList.size()))\r
{\r
- return (jalview.schemabinding.version2.Sequence) Unmarshaller.unmarshal(jalview.schemabinding.version2.Sequence.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
-\r
- /**\r
- * Method validate\r
- * \r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
+ throw new IndexOutOfBoundsException();\r
+ }\r
+ _DBRefList.setElementAt(vDBRef, index);\r
+ } //-- void setDBRef(int, jalview.schemabinding.version2.DBRef)\r
+\r
+ /**\r
+ * Method setDBRef\r
+ *\r
+ *\r
+ *\r
+ * @param DBRefArray\r
+ */\r
+ public void setDBRef(jalview.schemabinding.version2.DBRef[] DBRefArray)\r
+ {\r
+ //-- copy array\r
+ _DBRefList.removeAllElements();\r
+ for (int i = 0; i < DBRefArray.length; i++)\r
{\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- } //-- void validate() \r
+ _DBRefList.addElement(DBRefArray[i]);\r
+ }\r
+ } //-- void setDBRef(jalview.schemabinding.version2.DBRef)\r
+\r
+ /**\r
+ * Method unmarshal\r
+ *\r
+ *\r
+ *\r
+ * @param reader\r
+ * @return Object\r
+ */\r
+ public static java.lang.Object unmarshal(java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ return (jalview.schemabinding.version2.Sequence) Unmarshaller.unmarshal(\r
+ jalview.schemabinding.version2.Sequence.class, reader);\r
+ } //-- java.lang.Object unmarshal(java.io.Reader)\r
+\r
+ /**\r
+ * Method validate\r
+ *\r
+ */\r
+ public void validate()\r
+ throws org.exolab.castor.xml.ValidationException\r
+ {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.\r
+ Validator();\r
+ validator.validate(this);\r
+ } //-- void validate()\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff