import java.io.Reader;\r
import java.io.Serializable;\r
import java.io.Writer;\r
+import java.util.Enumeration;\r
+import java.util.Vector;\r
import org.exolab.castor.xml.MarshalException;\r
import org.exolab.castor.xml.Marshaller;\r
import org.exolab.castor.xml.Unmarshaller;\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class Sequence extends SequenceType \r
+public class Sequence extends jalview.schemabinding.version2.SequenceType \r
implements java.io.Serializable\r
{\r
\r
\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _DBRefList\r
+ */\r
+ private java.util.Vector _DBRefList;\r
+\r
+\r
//----------------/\r
//- Constructors -/\r
//----------------/\r
\r
public Sequence() {\r
super();\r
+ _DBRefList = new Vector();\r
} //-- jalview.schemabinding.version2.Sequence()\r
\r
\r
//-----------/\r
\r
/**\r
+ * Method addDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param vDBRef\r
+ */\r
+ public void addDBRef(jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _DBRefList.addElement(vDBRef);\r
+ } //-- void addDBRef(jalview.schemabinding.version2.DBRef) \r
+\r
+ /**\r
+ * Method addDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param index\r
+ * @param vDBRef\r
+ */\r
+ public void addDBRef(int index, jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ _DBRefList.insertElementAt(vDBRef, index);\r
+ } //-- void addDBRef(int, jalview.schemabinding.version2.DBRef) \r
+\r
+ /**\r
+ * Method enumerateDBRef\r
+ * \r
+ * \r
+ * \r
+ * @return Enumeration\r
+ */\r
+ public java.util.Enumeration enumerateDBRef()\r
+ {\r
+ return _DBRefList.elements();\r
+ } //-- java.util.Enumeration enumerateDBRef() \r
+\r
+ /**\r
+ * Method getDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param index\r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef getDBRef(int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ //-- check bounds for index\r
+ if ((index < 0) || (index > _DBRefList.size())) {\r
+ throw new IndexOutOfBoundsException();\r
+ }\r
+ \r
+ return (jalview.schemabinding.version2.DBRef) _DBRefList.elementAt(index);\r
+ } //-- jalview.schemabinding.version2.DBRef getDBRef(int) \r
+\r
+ /**\r
+ * Method getDBRef\r
+ * \r
+ * \r
+ * \r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef[] getDBRef()\r
+ {\r
+ int size = _DBRefList.size();\r
+ jalview.schemabinding.version2.DBRef[] mArray = new jalview.schemabinding.version2.DBRef[size];\r
+ for (int index = 0; index < size; index++) {\r
+ mArray[index] = (jalview.schemabinding.version2.DBRef) _DBRefList.elementAt(index);\r
+ }\r
+ return mArray;\r
+ } //-- jalview.schemabinding.version2.DBRef[] getDBRef() \r
+\r
+ /**\r
+ * Method getDBRefCount\r
+ * \r
+ * \r
+ * \r
+ * @return int\r
+ */\r
+ public int getDBRefCount()\r
+ {\r
+ return _DBRefList.size();\r
+ } //-- int getDBRefCount() \r
+\r
+ /**\r
* Method isValid\r
* \r
* \r
} //-- void marshal(org.xml.sax.ContentHandler) \r
\r
/**\r
+ * Method removeAllDBRef\r
+ * \r
+ */\r
+ public void removeAllDBRef()\r
+ {\r
+ _DBRefList.removeAllElements();\r
+ } //-- void removeAllDBRef() \r
+\r
+ /**\r
+ * Method removeDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param index\r
+ * @return DBRef\r
+ */\r
+ public jalview.schemabinding.version2.DBRef removeDBRef(int index)\r
+ {\r
+ java.lang.Object obj = _DBRefList.elementAt(index);\r
+ _DBRefList.removeElementAt(index);\r
+ return (jalview.schemabinding.version2.DBRef) obj;\r
+ } //-- jalview.schemabinding.version2.DBRef removeDBRef(int) \r
+\r
+ /**\r
+ * Method setDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param index\r
+ * @param vDBRef\r
+ */\r
+ public void setDBRef(int index, jalview.schemabinding.version2.DBRef vDBRef)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ //-- check bounds for index\r
+ if ((index < 0) || (index > _DBRefList.size())) {\r
+ throw new IndexOutOfBoundsException();\r
+ }\r
+ _DBRefList.setElementAt(vDBRef, index);\r
+ } //-- void setDBRef(int, jalview.schemabinding.version2.DBRef) \r
+\r
+ /**\r
+ * Method setDBRef\r
+ * \r
+ * \r
+ * \r
+ * @param DBRefArray\r
+ */\r
+ public void setDBRef(jalview.schemabinding.version2.DBRef[] DBRefArray)\r
+ {\r
+ //-- copy array\r
+ _DBRefList.removeAllElements();\r
+ for (int i = 0; i < DBRefArray.length; i++) {\r
+ _DBRefList.addElement(DBRefArray[i]);\r
+ }\r
+ } //-- void setDBRef(jalview.schemabinding.version2.DBRef) \r
+\r
+ /**\r
* Method unmarshal\r
* \r
* \r