Save graph threshold and annotation colours

[jalview.git] / src / jalview / schemabinding / version2 / ViewportDescriptor.java

diff --git a/src/jalview/schemabinding/version2/ViewportDescriptor.java b/src/jalview/schemabinding/version2/ViewportDescriptor.java
index 66a3d77..02e9be9 100755 (executable)
--- a/src/jalview/schemabinding/version2/ViewportDescriptor.java
+++ b/src/jalview/schemabinding/version2/ViewportDescriptor.java
@@ -57,6 +57,9 @@ public class ViewportDescriptor extends org.exolab.castor.xml.util.XMLClassDescr
         super();\r
         nsURI = "www.jalview.org";\r
         xmlName = "Viewport";\r
+        \r
+        //-- set grouping compositor\r
+        setCompositorAsSequence();\r
         org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
         org.exolab.castor.xml.XMLFieldHandler              handler        = null;\r
         org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
@@ -1115,6 +1118,40 @@ public class ViewportDescriptor extends org.exolab.castor.xml.util.XMLClassDescr
         desc.setValidator(fieldValidator);\r
         //-- initialize element descriptors\r
         \r
+        //-- _annotationColours\r
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.AnnotationColours.class, "_annotationColours", "AnnotationColours", org.exolab.castor.xml.NodeType.Element);\r
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
+            public java.lang.Object getValue( java.lang.Object object ) \r
+                throws IllegalStateException\r
+            {\r
+                Viewport target = (Viewport) object;\r
+                return target.getAnnotationColours();\r
+            }\r
+            public void setValue( java.lang.Object object, java.lang.Object value) \r
+                throws IllegalStateException, IllegalArgumentException\r
+            {\r
+                try {\r
+                    Viewport target = (Viewport) object;\r
+                    target.setAnnotationColours( (jalview.schemabinding.version2.AnnotationColours) value);\r
+                }\r
+                catch (java.lang.Exception ex) {\r
+                    throw new IllegalStateException(ex.toString());\r
+                }\r
+            }\r
+            public java.lang.Object newInstance( java.lang.Object parent ) {\r
+                return new jalview.schemabinding.version2.AnnotationColours();\r
+            }\r
+        } );\r
+        desc.setHandler(handler);\r
+        desc.setNameSpaceURI("www.jalview.org");\r
+        desc.setMultivalued(false);\r
+        addFieldDescriptor(desc);\r
+        \r
+        //-- validation code for: _annotationColours\r
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+        { //-- local scope\r
+        }\r
+        desc.setValidator(fieldValidator);\r
     } //-- jalview.schemabinding.version2.ViewportDescriptor()\r
 \r
 \r