/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
package jalview.schemes;
import jalview.analysis.AAFrequency;
-
-import java.awt.Color;
-import java.util.Map;
-
import jalview.datamodel.AnnotatedCollectionI;
import jalview.datamodel.SequenceCollectionI;
import jalview.datamodel.SequenceI;
+import java.awt.Color;
+import java.util.Map;
+
public class Blosum62ColourScheme extends ResidueColourScheme
{
public Blosum62ColourScheme()
if (max.indexOf(res) > -1)
{
+ // TODO use a constant here?
currentColour = new Color(154, 154, 255);
}
else
if (c > 0)
{
+ // TODO use a constant here?
currentColour = new Color(204, 204, 255);
}
else