this.av = av;\r
}\r
\r
- public Color findColour(SequenceI seq, String s, int j, Vector aa)\r
+ public Color findColour(String s, int j, Vector aa)\r
{\r
- if (!s.equals("-") && !s.equals(".") && !s.equals(" "))\r
+\r
+ if (!jalview.util.Comparison.isGap((s.charAt(0))))\r
{\r
String max = av.getVisibleConsensus().charAt(j) + "";\r
\r