* - the parent viewport
* @param sg
* - the collection of sequences to be coloured
- * @param hiddenRepSequences
* @return copy of current scheme with any inherited settings transferred
*/
ColourSchemeI getInstance(AlignViewportI viewport,
- AnnotatedCollectionI sg,
- Map<SequenceI, SequenceCollectionI> hiddenRepSequences);
+ AnnotatedCollectionI sg);
/**
* Answers true if the colour scheme is suitable for the given data, else