*/\r
package jalview.schemes;\r
\r
-import java.util.*;\r
-\r
import java.awt.*;\r
\r
public interface ColourSchemeI\r
\r
public Color findColour(String s, int j);\r
\r
- public void setConsensus(Vector v);\r
+ public void setConsensus(java.util.Vector v);\r
+\r
+ public void setConservation(jalview.analysis.Conservation c);\r
+\r
+ public boolean conservationApplied();\r
+\r
+ public void setConservationInc(int i);\r
+\r
+ public int getConservationInc();\r
+\r
+ public int getThreshold();\r
+\r
+ public void setThreshold(int ct, boolean ignoreGaps);\r
+\r
+\r
}\r