public static final int TCOFFEE = 15;
+ public static final int RNAINTERACTION = 16;
+
/**
* index of first colourscheme (includes 'None')
*/
{
ret = PURINEPYRIMIDINE;
}
+
+ else if (name.equalsIgnoreCase("RNA Interaction type"))
+ {
+ ret = RNAINTERACTION;
+ }
// else if (name.equalsIgnoreCase("Covariation"))
// {
// ret = COVARIATION;
{
index = TCOFFEE;
}
+
+
+
/*
* else if (cs instanceof CovariationColourScheme) { index = COVARIATION; }
*/
ret = "T-Coffee Scores";
break;
+
+ case RNAINTERACTION:
+ ret = "RNA Interaction type";
+
+ break;
/*
* case COVARIATION: ret = "Covariation";
*
// case COVARIATION:
// cs = new CovariationColourScheme(annotation);
-
- // break;
+ // break;
case USER_DEFINED:
Color[] col = new Color[24];