JAL-2630 first pass groovy colour scheme (with slight refactoring)

[jalview.git] / src / jalview / schemes / ColourSchemes.java

diff --git a/src/jalview/schemes/ColourSchemes.java b/src/jalview/schemes/ColourSchemes.java
index 5707876..817fb01 100644 (file)
--- a/src/jalview/schemes/ColourSchemes.java
+++ b/src/jalview/schemes/ColourSchemes.java
@@ -6,6 +6,7 @@ import jalview.datamodel.SequenceCollectionI;
 import jalview.datamodel.SequenceI;
 
 import java.awt.Color;
+import java.io.File;
 import java.io.FileInputStream;
 import java.io.InputStreamReader;
 import java.util.LinkedHashMap;
@@ -182,14 +183,15 @@ public class ColourSchemes
    * definition of residue colours in XML format as defined in
    * JalviewUserColours.xsd.
    * 
-   * @param file
+   * @param filePath
    * 
    * @return
    */
-  public static UserColourScheme loadColourScheme(String file)
+  public static UserColourScheme loadColourScheme(String filePath)
   {
     UserColourScheme ucs = null;
     Color[] newColours = null;
+    File file = new File(filePath);
     try
     {
       InputStreamReader in = new InputStreamReader(