aaIndex replaces aaHash

[jalview.git] / src / jalview / schemes / Consensus.java

diff --git a/src/jalview/schemes/Consensus.java b/src/jalview/schemes/Consensus.java
index 92dde08..520196f 100755 (executable)
--- a/src/jalview/schemes/Consensus.java
+++ b/src/jalview/schemes/Consensus.java
@@ -70,8 +70,7 @@ public class Consensus
 \r
     while (i < s.length())\r
     {\r
-      out[i] = ( (Integer) ResidueProperties.aaHash.get(s.substring(i,\r
-          i + 1))).intValue();\r
+      out[i] = ResidueProperties.aaIndex[s.charAt(i)];\r
       i++;\r
     }\r
 \r